Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02069 ATGGAAATTCAAGCTGAGATTGTGTCTAAGCAAACCATAAAGCCATCCTCTCCAACCCCATCTCACCTCAGAGATTTCAAACTCTCCTTTCTTGATCAATTGGCACCTGAATCTTATGTCCCAGCTTTCCTCATATACTCTGCACATGATGTCACTAGTTCTGGCCTTGATTTTCCATCCTTGAGTGGAAAACTGAAGGCTTCCCTTTCAGATGTGCTATCTGTTTACTACCCTTTTTGTGGAAGGATCAAAGGGAATACCTACATTGATTGCAATGATGCAGGGGTGCTTTACATTGAGGCCAGAGTCCCCATCACTCTCAGTGATCTCCAACAAAATGTAAAGGTGAAAACTTTAAATCAATTTCTCCCAATTGACCCAATTGAACCAGCTGGTGGGCGTTTGAATAGTGAGGAACAAGTACTCTTGGCCATTCAGGTTACTGAACTCACTTGTGGTGCTGTAGGAATTGGTATTTGCATCCTACACAAGGTTGCTGATGGCACTGCCATGGGTTCATTCCTCAGTGCTTGGGGTGCAATAGCAAATGCAAGTGGTAACACAACAAAACCTTATATGGAAGCAAGTTTGCTTTTTCCAACAAGGGGTATTGATTTTTGTAGTCCATTTAGTGGTCGTGCTGATAACAACAAAGATGTTGCAACCACAAGATTGGTGTTTGATGGGGAAAGCTTGTCTAGGCTAAAAGCTGAAATTGAAGGTGGCAATTTCACAAGGGTTGAATCTGTGACAGCTCTTATATGGAAGTTAATTATGGAGGCAGCCATAGCAAGTTCAAAGGAACAAAATCTTATTGTAAGGTCCTTTGCATCACAAGTGGTGAACATTCGTGGCCGTTTGGTGCAACCATTACCAGAGTATTATGTTGGAAATGTTTGTCAACTTGCTGTTACTCCATTGGTTGAACTCCAAGTGGATAACAAGGTTGAGTTGAAGGATTTGGCAATGATGGTTAGGAAATCCATAATGAAATTTGATGCAGATTATGTGAGTGAACTTGGGGGTGATGCTGGTTATGATATGGTTATTGAATCCTTGAAACAAATAATACACAATTCTAAGGGTGTTAGGTGGTATGACTTTACTAGTTGGGTTAGATTTCCTTTATATGAAGCTGATTTTGGGTGGGGAAAACCAACTTGGGCAGGTAGTGTTTGTTTGCCAATGGAAAATTGTATCAAATTGTTGCCTACAAGAGATGGGGTAGGAATTGAGGCATGGGTGAACTTGACTAGGCAGGATATGGCTGAATTTCAGAACAACCCAAAGCTTCTCCAGTATGCATCGGTGTCACCTGTTTCTTTCTAA 1329 0.4131 MEIQAEIVSKQTIKPSSPTPSHLRDFKLSFLDQLAPESYVPAFLIYSAHDVTSSGLDFPSLSGKLKASLSDVLSVYYPFCGRIKGNTYIDCNDAGVLYIEARVPITLSDLQQNVKVKTLNQFLPIDPIEPAGGRLNSEEQVLLAIQVTELTCGAVGIGICILHKVADGTAMGSFLSAWGAIANASGNTTKPYMEASLLFPTRGIDFCSPFSGRADNNKDVATTRLVFDGESLSRLKAEIEGGNFTRVESVTALIWKLIMEAAIASSKEQNLIVRSFASQVVNIRGRLVQPLPEYYVGNVCQLAVTPLVELQVDNKVELKDLAMMVRKSIMKFDADYVSELGGDAGYDMVIESLKQIIHNSKGVRWYDFTSWVRFPLYEADFGWGKPTWAGSVCLPMENCIKLLPTRDGVGIEAWVNLTRQDMAEFQNNPKLLQYASVSPVSF. 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02069 442 Gene3D - 2 204 IPR023213 -
Seca1g02069 442 Gene3D - 218 435 IPR023213 -
Seca1g02069 442 PANTHER F21J9.9 6 436 - -
Seca1g02069 442 Pfam Transferase family 6 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02069 Seca-Chr1 43459199 43460527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02069 3 426 Monolignol Biosynthesis Gene Families AT5G48930 26.144 2.68e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02069 - K13065 egr:104439652 365.925