Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02053 ATGTTTGCTGATCTGGGTCATTTTTCTGTAAGAGCAATACAGAGTGCCTTCACTTGTGTGGTATTTCCCTGTCTCCTCCTTGCTTATATGGGCCAGGCTGCTTATTTGCTGAAGAATCCTTCTTATTCAAATATATTCTATGATTCTGTTCCAGGTGATATTTGCTGTTATAATGAGTGTTTGTGTATTACATACAAGTCACTGTCCTTAAAACTATAA 219 0.3699 MFADLGHFSVRAIQSAFTCVVFPCLLLAYMGQAAYLLKNPSYSNIFYDSVPGDICCYNECLCITYKSLSLKL. 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02053 72 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 54 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca1g02053 72 Pfam K+ potassium transporter 1 57 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02053 Seca-Chr1 43106622 43106948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02053 1 51 Inorganic Solute Cotransporters AT1G60160 84.615 3.94e-24 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02053 K03549 - jre:109021590 90.8929