Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02010 ATGCTCAATCTGAAGGTAGCAATTGATCAAGCTTTAAAAGGAAGGACAACAAACATCTTTGCTCACCGCTTGTCTACAATAAGAACAACTAACGTTATTGCTATCCTTCAAGCAGGGAGAGTGATTGAATTAGGTACTCATAATGAGCTCATGGAAATGAATGATGGACAAGGTGGTGAATATGCTCGTATGGTAGAGTTGCAGCAAGTAACAACTCAGAATGATGAATCCAAATATTCCAATCTTCAAATAGAAGGAAAGAGCTCTCACAGCCACAGGATGAGCATTCCTCAAAGTCCAGGAGTAAGTTTCAGATCAAGCACAACAGGCACTCCAATGTTGTATCCCTTCAGCCAAGGATTTTCAGTAGGCACACCTTACTTATACTCCATCCCATATGATCCTGATGATGATAGTTATGAAGATAATTTGAAAAGATCAAATTATCCAACTCCTTCACAGTGGCGTTTACTGAAAATTAATGCACCTGAGTGGGGAAGAGCTGTGCTAGGAATCTTGGGAGCAATAGGCTCAGGAGCAGTACAACCTGTAAAATTTATGGCAGAGAGGTTGACTAAAAGAATAAGAGAGAAAATGCTAGAAAAGCAGTATAGAAAACCAGTATAG 627 0.3971 MLNLKVAIDQALKGRTTNIFAHRLSTIRTTNVIAILQAGRVIELGTHNELMEMNDGQGGEYARMVELQQVTTQNDESKYSNLQIEGKSSHSHRMSIPQSPGVSFRSSTTGTPMLYPFSQGFSVGTPYLYSIPYDPDDDSYEDNLKRSNYPTPSQWRLLKINAPEWGRAVLGILGAIGSGAVQPVKFMAERLTKRIREKMLEKQYRKPV. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02010 208 PANTHER ABC TRANSPORTER B FAMILY 5 192 IPR039421 -
Seca1g02010 208 Gene3D ABC transporter type 1, transmembrane domain 70 83 IPR036640 GO:0005524|GO:0016020
Seca1g02010 208 Gene3D ABC transporter type 1, transmembrane domain 136 208 IPR036640 GO:0005524|GO:0016020
Seca1g02010 208 MobiDBLite consensus disorder prediction 85 105 - -
Seca1g02010 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 68 IPR027417 -
Seca1g02010 208 Gene3D - 5 69 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02010 Seca-Chr1 41167939 41168708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02010 7 71 Calmodulin-binding Proteins AT2G36910 49.231 2.37e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02010 K05658 - gmx:100788127 278.485