Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01899 ATGGAAAACATTAATGAAAACATTGGTGAGAATGTTGTTGGGTTGGAAGAAATTGAAAGTGAAGATGATGGTGACAATGCATTTCATTACGACTCTCGTGAATTTGTAATTGGGGTGGATTCTGAGGCTGATTTTGTTGACCTTAATCCTGACTTGTTAACTGAGGAAAACTTGAGGAATTTTAATTTTCCTAATTTGGATGTTGCTTATTTATTTTATAATAATTGGTATGGAAAAATGAAGGGTTTTTCAGCACGAAAGGGCAAAGAACGTAAAAATGCAATGGAAGAAATTATTGAGAAGACGTATCTATGCCATAGGGAAGGAAAGAGACCAATTAATACGAATGAAAAGACGAGGAAGAAAAAACGTGAAGCAAAGCCTGAGACAAGGTGTTTATGTCCTGCAAAAATGAAGGTTCGGTTAGATGTACATTGTGGCCATTGGAACGTGACCAAGTTTTGTGATGCTCACAATCATGAAATGCTAAACCCCAAATACACAAGGATGCTACCGGCTCATAAGAAATTGAGTGAAGCTGATATCTTGGAGATGAATAACATGCGGAATGCAGGTATTACTACACCTCAAATTTATGGGTCATTTGCGAGCTAA 615 0.3691 MENINENIGENVVGLEEIESEDDGDNAFHYDSREFVIGVDSEADFVDLNPDLLTEENLRNFNFPNLDVAYLFYNNWYGKMKGFSARKGKERKNAMEEIIEKTYLCHREGKRPINTNEKTRKKKREAKPETRCLCPAKMKVRLDVHCGHWNVTKFCDAHNHEMLNPKYTRMLPAHKKLSEADILEMNNMRNAGITTPQIYGSFAS. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01899 204 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 202 - -
Seca1g01899 204 Pfam FAR1 DNA-binding domain 72 163 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01899 Seca-Chr1 36918610 36919224 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g01899 FAR1 8.8e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01899 - - mtr:112420053 159.458