Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01852 ATGTTTGACGAAAAAAATGGTGTGAAGGAGCAAGATCCAAGGCTGCAGGCCATCTCCGAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGCTTTGATTGGTCTACGTGCTCGTGTAATTGGATTGGATTATATGCAGGAATAGAAGCCAGGGGATTCTTCTTTGGTCCCTCAATTGCGTTAGGCATTGGGGCCAAGTTTGTTCCTTTGGCAAACCTCGAAAGCTGCCAGGTACACCTGTATTCATGTTCAATATTAATTGAGCACTGCTACTAA 279 0.4588 MFDEKNGVKEQDPRLQAISEAIRVVPHFPKQGFDWSTCSCNWIGLYAGIEARGFFFGPSIALGIGAKFVPLANLESCQVHLYSCSILIEHCY. 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01852 92 Gene3D - 5 89 IPR029057 -
Seca1g01852 92 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 43 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01852 Seca-Chr1 34697457 34698870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01852 1 71 PRT Gene Family AT5G11160 50.000 1.22e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01852 K00759 - gmx:100499904 83.9593