Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01815 ATGGATGGAGATAGTGGTAGAGATAAGAGCAACAATGAGAGAAATTTTGATTTGAATGAATTGCCTATAGAAGACAATTTTACAGGGAATACTTGTTTAAAAATAGTTCAACATGTTGAAGATTTAGAGGAAACAATCATTATACCCATAGATGAGAATCCTGTGGTTAATGAGTTTTTAGAAGAAATTGATAAAATTGGAAATTTTGAGGAGACAAATGTTGTGCCTTTTGTTGGTCAGATTTTTCTGAGTGAGGAAGAAGCATACTCCTTTTATAAGAGGTATGCATATCAACATGGGTTCTCAATTCGTAAAGGTAGATTTGTTAAACGAAATGGAATTATAAATAGGCGTGATTTTTTTTGCTATCGTGAAGGAAGAGTCCCCTTGAAAGTTTTAGAACCATCAAAAGAACAAAGAAAAAGGGAATCCTAA 435 0.3264 MDGDSGRDKSNNERNFDLNELPIEDNFTGNTCLKIVQHVEDLEETIIIPIDENPVVNEFLEEIDKIGNFEETNVVPFVGQIFLSEEEAYSFYKRYAYQHGFSIRKGRFVKRNGIINRRDFFCYREGRVPLKVLEPSKEQRKRES. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01815 144 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 142 - -
Seca1g01815 144 Pfam FAR1 DNA-binding domain 90 134 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01815 Seca-Chr1 33635943 33636377 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g01815 FAR1 9.1e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01815 - - gmx:100791505 169.474