Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca1g01815 | ATGGATGGAGATAGTGGTAGAGATAAGAGCAACAATGAGAGAAATTTTGATTTGAATGAATTGCCTATAGAAGACAATTTTACAGGGAATACTTGTTTAAAAATAGTTCAACATGTTGAAGATTTAGAGGAAACAATCATTATACCCATAGATGAGAATCCTGTGGTTAATGAGTTTTTAGAAGAAATTGATAAAATTGGAAATTTTGAGGAGACAAATGTTGTGCCTTTTGTTGGTCAGATTTTTCTGAGTGAGGAAGAAGCATACTCCTTTTATAAGAGGTATGCATATCAACATGGGTTCTCAATTCGTAAAGGTAGATTTGTTAAACGAAATGGAATTATAAATAGGCGTGATTTTTTTTGCTATCGTGAAGGAAGAGTCCCCTTGAAAGTTTTAGAACCATCAAAAGAACAAAGAAAAAGGGAATCCTAA | 435 | 0.3264 | MDGDSGRDKSNNERNFDLNELPIEDNFTGNTCLKIVQHVEDLEETIIIPIDENPVVNEFLEEIDKIGNFEETNVVPFVGQIFLSEEEAYSFYKRYAYQHGFSIRKGRFVKRNGIINRRDFFCYREGRVPLKVLEPSKEQRKRES. | 145 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca1g01815 | 144 | PANTHER | FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED | 18 | 142 | - | - | |
Seca1g01815 | 144 | Pfam | FAR1 DNA-binding domain | 90 | 134 | IPR004330 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca1g01815 | Seca-Chr1 | 33635943 | 33636377 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | FAR1 | Seca1g01815 | FAR1 | 9.1e-07 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca1g01815 | - | - | gmx:100791505 | 169.474 |