Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01798 ATGAATAAGGAACTTTCCAAATTGATGATTCAATTGGAATTAGATGCAGACAGAGGATTTAAAGGGAACAGGAGAGGAGGTGAAGTGAATCAACCCAAGCTATATAGAGGGCCAGGGAAAGAGGGGAAATTCAGGGGAGACCCAAATTTATATGTGGTTGGTTGGGCTAATTTTGCATTTTATGCCACTGATTTTGGGTGGGGAAAACCTGTTTGTTTGGTTCCTGGGGGCATTAATTCTGATGGTAAGGCTTTCATTCTTAATACAGGAAGTGGTGATGGGTTTATTGTGGCCATTTGTTTGCAACCTTCACATGTTGATGCTTTGAAGAAGTTGTTTTATGAGGATATGGAGACTACTACTTCCAATAAGAGAAACATTAATTTCCCACTGCTTGATGCTGGTTGTATCTGGTCTGTTGCATCAGCTGCAAGTTATTCAGATCCCCGTGATGCATGTGCTGCCATTGCTGGAGAGTCTTATAAACTATGGTTGGAACATGGGGGCCGGACAGATGATATAACGATTATCATTGTTCACATCAAAGGCCTGTCTAATTCAGGTACACCTGGATTCGGATCAGGCGACATCAATGTCAGTACTGTAACGAGGGCCAAGAAGGGAAAGGGAACTTTTGAGATATCTACTACCACTGGGTTAGATGTTTATCATCCTGTGAGGAATGGTTTCTCTGATTTACAGTCCTGTCAGCATGTGGTCTCAACGAGAAGCCCATCCTTAGTAGTTCCCTTTCCAGCATGTCAAAGACCAATTGAATTGGTAGAGTCTTGCTAG 795 0.4252 MNKELSKLMIQLELDADRGFKGNRRGGEVNQPKLYRGPGKEGKFRGDPNLYVVGWANFAFYATDFGWGKPVCLVPGGINSDGKAFILNTGSGDGFIVAICLQPSHVDALKKLFYEDMETTTSNKRNINFPLLDAGCIWSVASAASYSDPRDACAAIAGESYKLWLEHGGRTDDITIIIVHIKGLSNSGTPGFGSGDINVSTVTRAKKGKGTFEISTTTGLDVYHPVRNGFSDLQSCQHVVSTRSPSLVVPFPACQRPIELVESC. 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01798 264 Pfam Transferase family 40 114 - -
Seca1g01798 264 Gene3D - 28 116 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01798 Seca-Chr1 32979422 32982293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01798 146 187 PP2C-type Phosphatase Gene Family AT3G06270 78.571 2.18e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01798 - - gsj:114373061 191.045