Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01753 ATGGAGCTTTTACAAGTTGAATCCAATGGTGTTAGAGTTTTGGGGCTATATGGGATGGGTGGGATTGGTAAGACAACCCTTGCCAAAGCTCTTTTCAATAGCCTTGTTGGTCATTTTGAACGTCCCTGCTTCATTTCAAATGTCAAACAATATTCATCCAAAGAAGGTGGGTTGGTTTCTCTTCAAAGCAAAATCATTAGAGATCTTTCCCCTGAAAAGGGGTCAAGAGTTCATATCAGTGATGTTAATGTTGGTATTAGACGAGTACTTCGTGAAAATCGAGTTCTTCTAGTCTTGGATGATGTTGATGATATAAACCAACTTGATGCTTTGATTGGTAAAAGGGAATGGTTTTATGAAGGAAGCTGTGTAATAATTACCACAAGGGATAAACATGTTTTGGTCCAGGGTCATGTCAATGAGTTGTTTGAAGTTCAGGAATTGTATCCTTCTGAAGCTCTAGAGTTATTCAGTTACCATGTTGTAGTAGAGCCTGAAGAGGCTTGA 507 0.3886 MELLQVESNGVRVLGLYGMGGIGKTTLAKALFNSLVGHFERPCFISNVKQYSSKEGGLVSLQSKIIRDLSPEKGSRVHISDVNVGIRRVLRENRVLLVLDDVDDINQLDALIGKREWFYEGSCVIITTRDKHVLVQGHVNELFEVQELYPSEALELFSYHVVVEPEEA. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01753 168 PRINTS Disease resistance protein signature 89 103 - -
Seca1g01753 168 PRINTS Disease resistance protein signature 13 28 - -
Seca1g01753 168 Pfam NB-ARC domain 6 164 IPR002182 GO:0043531
Seca1g01753 168 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 161 IPR044974 GO:0006952
Seca1g01753 168 Gene3D - 1 142 IPR027417 -
Seca1g01753 168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 162 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01753 Seca-Chr1 31058765 31059271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01753 11 158 WRKY Transcription Factor Family AT5G45050 37.838 2.71e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01753 - - mtr:11408681 214.542