Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01715 ATGGTTTCATGTCAGGAAGAGGTGAAGCTTTTGGGAACTGTTGGAAGCCCATTTGTCAATAGGGTTCATATTGCTCTTAAATTGAAAGGAGTTGAATACAAATTTCCGGAAGAAGACTTTAGCAATAAGACTGATATGCTCCTGAAATACACTACAAGATGGTTCCTAGATTTGTTCACAATGGGAAGCCCATATCGGAATCCCTTGTGA 210 0.3952 MVSCQEEVKLLGTVGSPFVNRVHIALKLKGVEYKFPEEDFSNKTDMLLKYTTRWFLDLFTMGSPYRNPL. 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01715 69 Gene3D Glutaredoxin 1 53 - -
Seca1g01715 69 SUPERFAMILY Thioredoxin-like 6 53 IPR036249 -
Seca1g01715 69 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 69 IPR004045 -
Seca1g01715 69 Pfam Glutathione S-transferase, N-terminal domain 16 58 IPR004045 -
Seca1g01715 69 PANTHER GST N-TERMINAL DOMAIN-CONTAINING PROTEIN 5 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01715 Seca-Chr1 29550563 29550772 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01715 3 49 Glutathione S-transferase Gene Family AT2G29420 57.447 5.27e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01715 K00799 - gmx:548029 75.8701