Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01714 ATGGAATTTCTTGAGAATGAGCTGAAGGACAAGTTCCTTGGTGGAGAGGAGTTTGGCTTTGTGGATATTATAGCTCTTGTCTTCATAGGCTTTTGGATCCCTGTTATTCAAGATGTAGTAGGGCTGCAGTTGTTTACTAGGGACAAATTTCCCAAGCTCTACAAATGGAGGCAAGAATTTCTCAACCACCCAATTATAAAAAATTGCCTCCAAGAGAACCACTTCTTGACTTCTTCAAAGCTCACTACAAAACCTAGCCTTGCTACTTCAAATTAA 276 0.3986 MEFLENELKDKFLGGEEFGFVDIIALVFIGFWIPVIQDVVGLQLFTRDKFPKLYKWRQEFLNHPIIKNCLQENHFLTSSKLTTKPSLATSN. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01714 91 SUPERFAMILY GST C-terminal domain-like 2 75 IPR036282 -
Seca1g01714 91 CDD GST_C_Tau 1 70 IPR045074 GO:0004364|GO:0006749
Seca1g01714 91 Pfam Glutathione S-transferase, C-terminal domain 2 64 IPR004046 -
Seca1g01714 91 Gene3D - 1 88 - -
Seca1g01714 91 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 86 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01714 Seca-Chr1 29547288 29547563 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01714 1 78 Glutathione S-transferase Gene Family AT3G09270 41.772 2.24e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01714 K00799 - gmx:547578 107.842