Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01693 ATGGAGAAGGAAAGTGGCATCGTGTTCCTCTATTGGCTGGGTCTAAACAGGTGCAGAAAGAGTTGTAGGCTAAGGTGGCTGAACTATCTCCGTCCTAACATCAAGAGAGGAAATTTTGATGAGGAAGAAGTGGAAATGATTGTCAAACTTCACAAATTACTAGGCAACAGGTCAACTTTGACTTTGAACTTTTCCTTTTGGTATTTTCCAGTGTGGGATATTGACAAGAATAATGTTTCATAA 243 0.3951 MEKESGIVFLYWLGLNRCRKSCRLRWLNYLRPNIKRGNFDEEEVEMIVKLHKLLGNRSTLTLNFSFWYFPVWDIDKNNVS. 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01693 80 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 34 IPR017930 -
Seca1g01693 80 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 14 59 - -
Seca1g01693 80 Pfam Myb-like DNA-binding domain 16 45 - -
Seca1g01693 80 Gene3D - 6 35 - -
Seca1g01693 80 SUPERFAMILY Homeodomain-like 15 58 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01693 Seca-Chr1 29242398 29243351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01693 14 57 MYB Transcription Factor Family AT5G16770 75.000 3.64e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01693 - K09422 gmx:100809746 93.9745