Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01691 ATGTTCTCAACTGCCACCGCAGACAGTGTTCCGGCAGCAGCGTCACCGTACAATTCCACGGTGGCGACGAGCCTCGGACGGCGGAGGATTCCAATACACACGACGTTCTACTGGGGCCACAAGGTGGACATACTGTTCCATTGCTGGCCCGGCGACAGCGCCGCCATGTATGCGGTGGCGTTAATCCTCGTGTTCGCCGTGGCGGTGCTGGTGGAGTGGCTCTCATTCACCAACATCGTGAAACTCAAGCCTGGGGGGTCAAACGACGTCGTCGGGGCCCTCCTTAGGACAGGGCTATACGGCGTGCGTTCCGGGCTCTCTTACTTGGTTATGCTGGCCGTCATGTCGTTTAACGGAGGCGTGTTTCTCGCCGCAATTGGCGGCCACGTCATCGGGTTCTTGGTTTTCGGTACACGGGCTATCATGAAGAAATCGAGCGGGTTGGATTCTTCTAAACCCACAAACAACATGATGATGGAGATGCAGATGAGCTTCTACTGGGGCAAACATGCCATAGTGCTTTTCTCTGGTTGGCCTAATCACAGCCTTGGCAATTACATCTTAGCTATGTTGTTTGTGTGCATCTTAGCTATGGCTATTGAGATTCTGTCTAACCAACCAGCCATCAAGCGTGGGACTAGTCCCTTAATTGGAGGGCTGATTCAGACTTGTGTCCACTTCTTTCGAATCAGTTTTGTTTATTTGGTGATGCTTGCTGTCATGTCCTTCAACGTGGGAATCTTCATAGCTGCTGTGGTTGGCCATTCCTTGGGATTCTTCATTGCCAGGTCTCGTGCTATTGCTATTGCAAACAGGGAAAATCAAGGGTCCTCCTCTGTTACTCTCAAGATTTGA 855 0.5181 MFSTATADSVPAAASPYNSTVATSLGRRRIPIHTTFYWGHKVDILFHCWPGDSAAMYAVALILVFAVAVLVEWLSFTNIVKLKPGGSNDVVGALLRTGLYGVRSGLSYLVMLAVMSFNGGVFLAAIGGHVIGFLVFGTRAIMKKSSGLDSSKPTNNMMMEMQMSFYWGKHAIVLFSGWPNHSLGNYILAMLFVCILAMAIEILSNQPAIKRGTSPLIGGLIQTCVHFFRISFVYLVMLAVMSFNVGIFIAAVVGHSLGFFIARSRAIAIANRENQGSSSVTLKI. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01691 284 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 32 144 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca1g01691 284 Pfam Ctr copper transporter family 35 77 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca1g01691 284 Pfam Ctr copper transporter family 213 261 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca1g01691 284 Pfam Ctr copper transporter family 94 136 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01691 Seca-Chr1 29231240 29235564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01691 164 275 Inorganic Solute Cotransporters AT5G59030 42.609 1.43e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01691 K14686 - gmx:100803410 265.003