Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01662 ATGGTGAATGAAATTGAATCAAATGAAGTTATGGGTCCGATAACAGAAGACGGTCAAATTCAACAATCGGTGGCTCCAAACATTCCAATGAATATTGAGGACGGTAATATTGATCACTCAGAAGACAAGTTAGAGATTCAGACTGGAATGCGTTTTGATAGCATGGAAGAAGCAAAAAGACTTTATCAAGAATATGAAATTAGAAAAGGATTTGCTATCGTCACGAGAAATTCTTGGAAAGGGGGTGATGGTAAAGCAATATACTATGTATTTTCTTGTTTAAGACAAGGGACATTTGTTTCTTCCACACCGGCTGATGTGTCGTCGAGGCCATCAACTAAATTGAATTGTACAGCCCACATTAATGTCACTCTCCGGAAAGATGGGTTTTGGTACATACAAAAATGTGTTCATGAACATGCTCATGACATTAGCCCTGGAAAGTCCCGTTTATTTGCAACCAATCGAAAGTTGAGTTTGCATGTGAAACGCCTTGTTCAATTGAACGATGAAGCAGGTGTTAGAGTAAATAAGAGTTTCCGATCTCTGGTTTATGATGCTGGAGGATATGAAAATGTGCCATTTGTTGAAAGAGACATTCGGAATGAACTGGGCAAGTAA 621 0.3865 MVNEIESNEVMGPITEDGQIQQSVAPNIPMNIEDGNIDHSEDKLEIQTGMRFDSMEEAKRLYQEYEIRKGFAIVTRNSWKGGDGKAIYYVFSCLRQGTFVSSTPADVSSRPSTKLNCTAHINVTLRKDGFWYIQKCVHEHAHDISPGKSRLFATNRKLSLHVKRLVQLNDEAGVRVNKSFRSLVYDAGGYENVPFVERDIRNELGK. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01662 206 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 200 - -
Seca1g01662 206 Pfam FAR1 DNA-binding domain 61 145 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01662 Seca-Chr1 28000705 28001325 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g01662 FAR1 5.8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01662 - - psat:127130074 176.792