Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01528 ATGGCTAAACCAGATAATGCAAAATCTGGGTGTTTCTCTAACTTTTTTCACCTACTTTTTTGTGCTGAGAATGGAAATAGTCCTCCATTAGTACCATTACACCCTTCTGATCATATTACAGAATCATATGTAACAGAACTAGTGCATCCAAATAAGGACTCAAATACAATTGTCAATGAAGCTAAACCAGGAGTGGTGGCTAGGCTAATGGGGCTTGATTCATTGCCAAATACCAACTTGGTAGCAAAAGGAAGTGCCCCAGATTTAGTTCCAAGAAGTAGGTCAGTGAACTTTTTGGACTATTTGCTTAAGTTTGATGTAAGCCAAGATAACCATCACAAAATGAAAACCTCAGCATCATTTAGAGAGGTTCCTGCATCATTTCAGAAGAAAAACCATGATGTTCTTGTGCTGTACTGGGGTAGTGGGAGTGAAGATCACAAAGTTGGATCCAATTTGAGGAAACAAGAAATGGGGTTGGGAGAATTGAGACAGAGGAAGAAGCAGGGGAGCAAGAACAAAGAGATTGTTAGAGAGAGGAGTATTGTGACAAAGGAGAGGAATCATGGGAAGAACAAGAGAATTTCCAAGTTCAAGAATGAGCCTATAATGGTCCCTGTTAAGCATAGTTCAAAGGTTAGAAATCAAAATGAAGCTAAAGTTTTGGCATCAGTTTCAGCAAGCTCCAAGAATTGTAGTTACAAAAAAAGTAGTACTGGGTCAAGATCAAGATCAACATTGCCAAATAAGCAGAAGAAAGTGTTATCAGAACCAAAACAGAAGAAAATTATGAGAAAACAACAATCACCAAAGAAGACAGAGACTTCATACAGCTCAGAAAATTTCAGTCCAATTTCAGTCCTAGACAACAATGATTACCAATTCCTTTATGGACCTGATTTTCTAGATTACACAAGTCCCTTGGTGTCAAAGTCAAAGTGGGAATTTTCAGAGCTGCTGTTTTTGGGTGATAGTGTTGAAGAGCGAGGAAGCAAGAATAAAGGCTATGTCTACCCTGACATCAACAGGGAAAAAGAGTGTTTATCAGAATTGATGCTGAAGCTTCGAACATTAATAGAAAATGATATGAGAGAATTTGATTGCACGCAAAAGTGTATGAGTGAGACTGAGATTTTGGAGGAAATTTGTTTGGTGTGTGAGCATAAAATTTTTGACATTTTACTACATGAGGTTGTCAATGAACTTGTAGAACTTTCATATTGA 1224 0.3766 MAKPDNAKSGCFSNFFHLLFCAENGNSPPLVPLHPSDHITESYVTELVHPNKDSNTIVNEAKPGVVARLMGLDSLPNTNLVAKGSAPDLVPRSRSVNFLDYLLKFDVSQDNHHKMKTSASFREVPASFQKKNHDVLVLYWGSGSEDHKVGSNLRKQEMGLGELRQRKKQGSKNKEIVRERSIVTKERNHGKNKRISKFKNEPIMVPVKHSSKVRNQNEAKVLASVSASSKNCSYKKSSTGSRSRSTLPNKQKKVLSEPKQKKIMRKQQSPKKTETSYSSENFSPISVLDNNDYQFLYGPDFLDYTSPLVSKSKWEFSELLFLGDSVEERGSKNKGYVYPDINREKECLSELMLKLRTLIENDMREFDCTQKCMSETEILEEICLVCEHKIFDILLHEVVNELVELSY. 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01528 407 MobiDBLite consensus disorder prediction 156 218 - -
Seca1g01528 407 MobiDBLite consensus disorder prediction 231 281 - -
Seca1g01528 407 MobiDBLite consensus disorder prediction 254 269 - -
Seca1g01528 407 MobiDBLite consensus disorder prediction 231 253 - -
Seca1g01528 407 PANTHER OS05G0128300 PROTEIN 1 406 - -
Seca1g01528 407 MobiDBLite consensus disorder prediction 156 189 - -
Seca1g01528 407 Pfam DUF761-associated sequence motif 63 79 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01528 Seca-Chr1 23965171 23967126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01528 1 402 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 27.549 2.72e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01528 - - gmx:100775965 490.345