Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01523 ATGACTGATGCAAATGTTGCTGCATTTGAGGCATTTCTCCAAGGGTGGTTGGTGCGCCAAAGAGGCTACCTTGATGAGCTTCTTTCAGCTCAGCAACACCATCACGAGTTGCAGGATGCTGATAGGAGGCAATTGATCAACAGGGTACTCTGCCACTATGGTCAATACTATGAAGAGAAATCAAGGATTGCCCACCAGAATATTTTGCTTCTTTTCTCACCCCCATGGTTCAGTTCATTGGAAAGAACCTTTCTTTGGATGGCGGGGTTCAAGCCAGGAATGACATTTCAGGTTGTGAACACAGCTTTGGAGGACTTGTCAGAAGGTCAGAGACAGAGGCTGAGCCAACTCAGCCAAGAGACCAAGCTGAAGGAGAGGACCCTCAACGACGAGTTGGCCAAGATTCAAGAGAGTGTGGCGGCGCCACCGATGCTGCACATGGCTAGAAGCCATGGGAGGGTGTGTGTGAGCAGGTCCTTCATGGCAGAGGAGAGTGCAGTTCCAGGCACCTTCAAGGAGACACTGGAGAATCTGGTGGCAAATGCAGATGCTTTGAGGACAAACACAGCTTTGAAAGTTTTCCAGATACTTAGACCAGCTCAGGTTGTCAACTTCTTGGTTGCTGTGGCTGAGCTTCAGCTTAGGATCAGAACTTGGGGTTTAGATAAGGATTCCCAGAGTGGAAGCCAAGGGTGA 696 0.4943 MTDANVAAFEAFLQGWLVRQRGYLDELLSAQQHHHELQDADRRQLINRVLCHYGQYYEEKSRIAHQNILLLFSPPWFSSLERTFLWMAGFKPGMTFQVVNTALEDLSEGQRQRLSQLSQETKLKERTLNDELAKIQESVAAPPMLHMARSHGRVCVSRSFMAEESAVPGTFKETLENLVANADALRTNTALKVFQILRPAQVVNFLVAVAELQLRIRTWGLDKDSQSGSQG. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01523 231 Coils Coil 100 120 - -
Seca1g01523 231 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
Seca1g01523 231 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
Seca1g01523 231 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01523 Seca-Chr1 23808831 23810599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01523 3 217 Calmodulin-binding Proteins AT1G77920 28.837 9.55e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01523 - - gmx:100780874 384.03