Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01518 ATGCCAGAAAGCTTCAACCATCACTCAGTATGGTATGAATCGATTTTGAAATCAATCTCTAACTCAACAGAAATGCTCTACACCTACAATGATGCAATTCATGGATTCTTTACAAGGCTAACAACTGAAGAAGCTCGATTGCTGAAGAGCCAAATCGGAGTTCTAAAGGTGTTTCCAGATAAACAATACAAGCTCCATACAACAAGAACCCCACACTTCCTTGGCCTTGACAAAATCCAGGGCACATTCCTCGAGACAAATGGCAAAGCAGGTAGTGACGTAATTGTTGGACTCCTCGATACCGGTGTTTGGCCTGAAAGCAAGAGCTTCAACGATACTGGATTTGGACCCATCCCTAGCACCTGGAAGGGAAAATGTGAAACAGGTACCAATTTCTCAACCTTGAACTGTAATAAGAAATTGATTGGAGCCAGGTATTATATAAAGGGCCAGGAGTCCTTCATGCCTCGAGATGATGATGGTCATGGCACCCATACTGCAAGCACAATTGCAGGGTCTCCGGTGCAAAACGCGAGCCTTTTTGGATATGCTAATGGAACAGCACGTGGGATGGCCCCGAGTGCTAGAGTCGCTATGTATAAGGTTTGTTGGAATGAAACTTGTGCCATTTCTGATATATTAGCTGCAATTGACCAGGCCATCATTGATAATGTAAATATCCTTTCCATTTCGCTCGGTGGTCTACCATTTGAGTACTATGAGGACCCTGTTGCAATCGGAGCCTTTTCGGCAATGGAGCATGGGATTCTAGTCTCTTGCTCTGCAGGAAATGCTGGTCCTGAACCCGCCAGTGCTACCAATATAGCACCTTGGATGATCACCGTGGGAGCTGGCACACTCGATGGAGATTTTCCTGCATACGTTAGAATCGGAAATGGACAAAATTATTCTGGAGTGTCCCTTTATAATGGAAATCCGTTGCCTGATCATCCATTGCCATTTATATACGCAGGGAATGCAAGCAAAGACAAGTCCTCCAAGATTAGTTCTGAATATTGCTTGAAGGATAGCTTGGCGACAGAAAAAGTTAAGGGAAAAATTGTATTGTGTGATCGTGGACAAAGTAGTAGGATAGAGAAAGGAAATATAGTGAAATCTGTTGGCGGTTTGGGCATGGTTTTAGCTAATATGGCCCTTGAAGGAGAGGAACTAGTGGCAGATGCCCATATTTTGCCCGCAACTTTAGTGGGCTCAAAAGAAGGTAATGCCATCAAGCAATACTTGTTTTCTAATCCAAAATCGACGGGTACAATTGTATTTCAGGGAACAAAGCTTGGAATTGAGCCATCGCCGGTTGTTGCATCATTTAGCTCTCGGGGCCCTAATTCTATCACCCCAAAGATATTAAAGCCTGATTTGATCGCACCAGGTGTTAACATCTTAGCAGCATATTCAAGAAATTCAGATGATAGACGTGTGGACTTCAACATCATCTCAGGCACGTCCATGTCATGCCCTCATGTCAGTGGGCTAGCAGCTCTAATCAAGTCGGCTCATCCAGATTGGAGCCCAGCTATGATTCGATCTGCATTGATGACCACGAGTTATACAACTTACAAGAATGATCAACCATTGTTAGACAGTGCCAACAAAAAACCAGCAACGCCGTTTGATTATGGTGCTGGACACGTGGATCCTGTTCCTGCGCTTAATCCAGGACTGGTTTATGATTTGACAGTGGATGATTATCTAAGCTTCCTTTGTGCGTTGAACTACACAGCTGATAACATCGAAGCTGTGACAAGGAGAAAGTATAAGTGTGATCCAAACAAACAATACAGTGTAACTGACCTTAATTACCCTTCATTTGCTGTGGTGTTTAAAAAGCCAACAGTTAAACACATGCGAACTCTTACCAATGTGGGGTTTGCGGGAACGTACAAGGTATCAGTTAAGTTGGATATCCCAAATGTTAAGGTCTCAGTTGAGCCGGGAGTGTTGAGTTTCAAGGAGGAAAATGAGAAAAAATCATATACAATTACATTTTCAGGTACATTTCCAACATCAATAATGAAACCGCAAGATGGTTATGGTTTTGGACGTTTAGAATGGTCAGATGGAAAACATGTTGTGGGAAGTCCAATTGCAGTTAGCTTGGGATGA 2124 0.4313 MPESFNHHSVWYESILKSISNSTEMLYTYNDAIHGFFTRLTTEEARLLKSQIGVLKVFPDKQYKLHTTRTPHFLGLDKIQGTFLETNGKAGSDVIVGLLDTGVWPESKSFNDTGFGPIPSTWKGKCETGTNFSTLNCNKKLIGARYYIKGQESFMPRDDDGHGTHTASTIAGSPVQNASLFGYANGTARGMAPSARVAMYKVCWNETCAISDILAAIDQAIIDNVNILSISLGGLPFEYYEDPVAIGAFSAMEHGILVSCSAGNAGPEPASATNIAPWMITVGAGTLDGDFPAYVRIGNGQNYSGVSLYNGNPLPDHPLPFIYAGNASKDKSSKISSEYCLKDSLATEKVKGKIVLCDRGQSSRIEKGNIVKSVGGLGMVLANMALEGEELVADAHILPATLVGSKEGNAIKQYLFSNPKSTGTIVFQGTKLGIEPSPVVASFSSRGPNSITPKILKPDLIAPGVNILAAYSRNSDDRRVDFNIISGTSMSCPHVSGLAALIKSAHPDWSPAMIRSALMTTSYTTYKNDQPLLDSANKKPATPFDYGAGHVDPVPALNPGLVYDLTVDDYLSFLCALNYTADNIEAVTRRKYKCDPNKQYSVTDLNYPSFAVVFKKPTVKHMRTLTNVGFAGTYKVSVKLDIPNVKVSVEPGVLSFKEENEKKSYTITFSGTFPTSIMKPQDGYGFGRLEWSDGKHVVGSPIAVSLG. 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01518 707 CDD PA_subtilisin_like 294 425 - -
Seca1g01518 707 PRINTS Subtilisin serine protease family (S8) signature 486 502 IPR015500 -
Seca1g01518 707 PRINTS Subtilisin serine protease family (S8) signature 158 171 IPR015500 -
Seca1g01518 707 PRINTS Subtilisin serine protease family (S8) signature 91 110 IPR015500 -
Seca1g01518 707 FunFam Subtilisin-like protease SBT1.5 574 707 - -
Seca1g01518 707 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 704 IPR045051 -
Seca1g01518 707 SUPERFAMILY Subtilisin-like 65 561 IPR036852 GO:0004252|GO:0006508
Seca1g01518 707 Pfam Subtilase family 91 549 IPR000209 GO:0006508|GO:0008236
Seca1g01518 707 Pfam PA domain 340 411 IPR003137 -
Seca1g01518 707 Pfam Fibronectin type-III domain 604 704 IPR041469 -
Seca1g01518 707 Pfam Peptidase inhibitor I9 4 66 IPR010259 -
Seca1g01518 707 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 66 IPR037045 -
Seca1g01518 707 Gene3D - 288 433 - -
Seca1g01518 707 Gene3D - 574 706 - -
Seca1g01518 707 ProSitePatterns Serine proteases, subtilase family, serine active site. 487 497 IPR023828 -
Seca1g01518 707 ProSiteProfiles Serine proteases, subtilase domain profile. 62 557 - -
Seca1g01518 707 Gene3D Peptidase S8/S53 domain 93 570 IPR036852 GO:0004252|GO:0006508
Seca1g01518 707 CDD Peptidases_S8_3 63 523 IPR034197 -
Seca1g01518 707 FunFam Subtilisin-like protease SBT1.5 93 298 - -
Seca1g01518 707 FunFam subtilisin-like protease SBT1.5 288 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01518 Seca-Chr1 23750107 23752305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01518 1 705 Subtilisin-like Serine Gene Family AT5G67360 63.536 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01518 - - gmx:100815413 978.008