Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01444 ATGAGGATTCCTCTTTTGTTCACCTGGTTATGGAGTTGTGTGAAGGAGGAGAGCTATTTGATAGGATCGTGCAGAAGGGTCACTATAGTGAGACAAGCTGTGAAGTTGATAAAGACTCTTGTTGAGGTTATGGACTCTTGTCACTCTCTTGGGGTTATTCATATAGACCTTAAGCCTGAGAACTTTCTATTTGATACTATTGATGAGGATGTAAAGCTCAAAGCCACCTTTTTGTTATGCTTCTTTCCTCCACAAAAATAG 261 0.3985 MRIPLLFTWLWSCVKEESYLIGSCRRVTIVRQAVKLIKTLVEVMDSCHSLGVIHIDLKPENFLFDTIDEDVKLKATFLLCFFPPQK. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01444 86 SUPERFAMILY Protein kinase-like (PK-like) 30 74 IPR011009 -
Seca1g01444 86 ProSiteProfiles Protein kinase domain profile. 1 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g01444 86 Gene3D Transferase(Phosphotransferase) domain 1 18 76 - -
Seca1g01444 86 Pfam Protein kinase domain 31 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g01444 86 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Seca1g01444 86 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01444 Seca-Chr1 22131346 22131606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01444 31 84 EF-hand Containing Proteins AT1G35670 62.500 2.51e-17 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca1g01444 Pkinase 1.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01444 K13412 - gmx:547825 80.8777