Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01413 ATGATTAGAGGCAGCGACGGCGAAGCAGTTTGCGGTCATGCTGAGATTGTATTTGCTCGACTTTGTGAAGGCAGATACAATCTGCCTTATAACCGTGGTTTATTGTGGTTTGAGTTTGCATTATTGATGGAAGAGTGTTTGTTTGATACAACAAATGCCACCAGTGAACAATCAAATATAGAGGGTTCTGATAACGGAGATGGTCATGTGAATGAAAACTTAAATGTGGATTTGTACAAGGTTGATGATGAAATTGATTTGAAGAAGATTGAGTTTGTTTCTATATCTGAAGTTGAGTTGAAGAAGTATCATTTCTGTAGTCGTAAAATGACATTTGAGTTCTACAATGCCTTTGATAAGAAGAGGGCATTTGCAGGTTATAGGCAAGAAAAGCATTTGAAAAGGGTTAATCGCAAAAGAGAACCTAGAGCAATGACTAGGTGTGGGTGTGGTGCATTTTTTCGGGTAAGGTTTGTAGGAGATACTGGAAGGTGTCATGTAAAAACATTATCTGATCATCACAGTCATGAGATGTTAGCTCAACAATTTGTAGGGGGATTTGAGAGGTTGGCATTTAGGAAGCGAGATATATATAATGAAATTAATAAACAAAGGCGCTTATTAGTAAGTGTTGTGAGAGTTGCATTTGCTTATCTGAGACAACTCCGTAAACGTGATTCTAACATGTTTTGGAGAAACACTGTTGATTCTGAAGGTAGACTTGAACATCTATTTTGGTGTGATGGAACTAGCCAAACTGATTATAGTGTATTTGGTGACGTTGTTGCCTTTGATGCCACATATCGGCGCAATAAGTACATGTCCCCTCTAGTTGTTTTTGCTGGAGTTAACCATCACAACCAAACAATTGTTTTTGGTAGTGGTCTAATTGCAAATGAATCGGAGGAGACTTATGTCTAG 921 0.3811 MIRGSDGEAVCGHAEIVFARLCEGRYNLPYNRGLLWFEFALLMEECLFDTTNATSEQSNIEGSDNGDGHVNENLNVDLYKVDDEIDLKKIEFVSISEVELKKYHFCSRKMTFEFYNAFDKKRAFAGYRQEKHLKRVNRKREPRAMTRCGCGAFFRVRFVGDTGRCHVKTLSDHHSHEMLAQQFVGGFERLAFRKRDIYNEINKQRRLLVSVVRVAFAYLRQLRKRDSNMFWRNTVDSEGRLEHLFWCDGTSQTDYSVFGDVVAFDATYRRNKYMSPLVVFAGVNHHNQTIVFGSGLIANESEETYV. 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01413 306 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 101 306 IPR031052 GO:0006355
Seca1g01413 306 Pfam MULE transposase domain 261 305 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01413 Seca-Chr1 21759394 21761263 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g01413 MULE 3.6e-10 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01413 - - adu:110280242 209.92