Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01406 ATGGAAGGTGATTTGGTTGTGAACGATGAAGAAGAAGCAGAGGATGAGGGGGGAGGTTTTCGGTATAGGTGTGTTGAGGATAACGGCGGAAACAATGATGGTGAACGTATAGAAATTAATAATGTCGGGGATATAGTGAAGTTGGATTTAAAGAATTTAAGCCCGCTTGAGGTTGGTTTATATTATGATTTTCAGAGTTTGGAATTGGCTGCCGAGTTTTATAAAAGTTACGCAAGGAAGAACGACTTTGTTGGTCGTGAGGGTAAGAAAAGGCACAATAAAGATGGAGTTGTGATACAACAAGCGTTTGTTTGCAACAGGGAAGGATTCAGAAGAGAGAGAGATGGTGGCACCCCGTCACAACGAAAACGACGTGCTAATACGAGGTGTGGCTGTAAGGCAGAATTCCGTGTGCATGTTAATGTGTTGTCTGGTAGGTGGTATGTGACATGGTTTGACGATGATCATAACCATGATCTGATGTCGGATGCTCATTGCGGGATGTTACCCGCTCATCAAAAGATGAGTAAAGGTCATGTTATGCAAATGAACAATTTCTTGAAGGCAGGTATACGTCCACCACACATATTGGCTGCATTCGCTCGTCAGGCAGGGGGGTATGAGAAGGTAGGGTTTCGTAAAAAGCACATGTACAACCAGATTGGTCAGCAAAGGCGTTGTTAG 684 0.4371 MEGDLVVNDEEEAEDEGGGFRYRCVEDNGGNNDGERIEINNVGDIVKLDLKNLSPLEVGLYYDFQSLELAAEFYKSYARKNDFVGREGKKRHNKDGVVIQQAFVCNREGFRRERDGGTPSQRKRRANTRCGCKAEFRVHVNVLSGRWYVTWFDDDHNHDLMSDAHCGMLPAHQKMSKGHVMQMNNFLKAGIRPPHILAAFARQAGGYEKVGFRKKHMYNQIGQQRRC. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01406 227 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 217 - -
Seca1g01406 227 MobiDBLite consensus disorder prediction 1 15 - -
Seca1g01406 227 MobiDBLite consensus disorder prediction 1 25 - -
Seca1g01406 227 Pfam FAR1 DNA-binding domain 72 161 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01406 Seca-Chr1 21537463 21538146 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g01406 FAR1 1.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01406 - - mtr:112418552 204.527