Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01362 ATGAGACAGTATGTTTGCAATAAGGAAGGATTAAGGAAGAAAAAACATTTCATGAGGTTAGATAGGAAAAGAGATCATAGACCTATCACTCACACTAAGTGTAATGCTAAGCTCCTGATCCACTACCATCAAAGGTCAGGTAAATGGAGAGTGGTCTCCTTTGAGGAGTGTCACAATCATGAACTTATTTCAGCAAAATTTGTGCATTTGATCCCTGCATACCGTAAAATGACTGATGCAGACAAAGCGCAGGTGGATAGTTTGCATTCGTTTGGGGTAAGAACATGTCACATAATGGGGTACCTCGTATCTCAAAAGGGTGGATATGGTGGTGTTGGTTTTACTAGAAAGGATTTATATAACTATTTGGACTGCAAAACTCATATGAAGATTAAAGATGGGGACACACGTGCTGCATTGAGTTATTTACAAGGCAAATCTGACAATGGAGGAACATTAGTTACTAGATACCAAAATACTAGAGATGGTAAGCTGAAATATCTATTTTGGGCAGATGCAGTTAGCAGATTTGATTATAAGTGTTTCGGTGATGTAGTGGCCTTTGACACCACTTATAAAAAGAACAGGTACAACTATCCCTTGGTTATCTTCTCCGGCTATGTATAA 627 0.3844 MRQYVCNKEGLRKKKHFMRLDRKRDHRPITHTKCNAKLLIHYHQRSGKWRVVSFEECHNHELISAKFVHLIPAYRKMTDADKAQVDSLHSFGVRTCHIMGYLVSQKGGYGGVGFTRKDLYNYLDCKTHMKIKDGDTRAALSYLQGKSDNGGTLVTRYQNTRDGKLKYLFWADAVSRFDYKCFGDVVAFDTTYKKNRYNYPLVIFSGYV. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01362 208 PANTHER OS01G0519700 PROTEIN 2 205 - -
Seca1g01362 208 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01362 Seca-Chr1 20697745 20698371 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g01362 FAR1 2.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01362 - - ccaj:109792835 294.664