Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01356 ATGCATTTCTTAGCAAGAAAAAATGCTTCTTCTGCAAAGCTTGTGTTGGCTCAAAAACCAATGCAGATTGCCATGAAAAGTCTTGAACACGAGTTCTACCAAATACTGTCTGCTAATCATGATCACCTTGATCCAGAATCAGTCTCAGACCTATCTTCAAGAGGTTCAGGGACAAGCAAATCTGATACACAATATGAGATTATATCAGAATAA 213 0.3756 MHFLARKNASSAKLVLAQKPMQIAMKSLEHEFYQILSANHDHLDPESVSDLSSRGSGTSKSDTQYEIISE. 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01356 70 Gene3D Exocyst complex component Exo70 1 70 - -
Seca1g01356 70 MobiDBLite consensus disorder prediction 49 70 - -
Seca1g01356 70 MobiDBLite consensus disorder prediction 43 70 - -
Seca1g01356 70 SUPERFAMILY Cullin repeat-like 1 54 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01356 Seca-Chr1 20669815 20670027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01356 1 46 EXO70 exocyst subunit family AT2G39380 67.391 1.31e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01356 K07195 - cave:132188283 82.4185