Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01333 ATGAATATCATTTCAATCTTCAAAACACGTTCCTTATTGTTATTCTTATGCTTTATTGGCATAGTCTCAGCTCAATTGTCCTCTGATTTTTACTCCTCAACGTGTCCTAATGTGCTTTCAACCATTAAGACAGCAGTAGACTCTGCTGTGAGCAATGAAGCTCGCATGGGAGCATCCCTGCTTCGTCTCCATTTCCATGATTGCTTTGTTCAAGCAAGTTCACTCTCACTTCTTTTCAATGGGTGTGATGCATCAGTTCTACTAGACGACACATCAAGTTTCACAGGTGAACAATCAGCATTTCCCAATGTTAATTCCTTAAGGGGTTTTGATGTAATAGACACCATAAAGTCTCAAGTGGAAAACTTGTGTCCTGGTGTTGTCTCTTGTGCTGACATCCTTGCTGTAGCTGCAAGAGACTCTGTTGTTGCTCTTGGTGGACCTAGTTGGACAGTGCCATTGGGGAGAAGAGACTCAACCACAGCAAGTTTGAGTTCTGCTAACTCTGACTTGCCTGGTCCTGCTTCTGATCTAAGTGACCTTATCTCTAATTTCTCCAACAAAGGTTTCACAACCAATGAAATGGTTGCTCTATCAGGATCTCACACAATTGGGCAAGCTAGCTGTAGAAACTTCAGAACAAGGATTTACAATGAGACCAACATAGATTCCACCTTTGCAACATCATTGCAAGCAAAATGTCCTAGCACTGGTGGTGATGGCAATTTGTCTCCAATTGACACCACCAGTCCAAACACCTTTGACAATGCTTACTTCAAGAATTTGCAGAGCCAAAAGGGTCTATTCCACTCAGATCAAGTGCTATTTAATGGAGGATCTACAGACTCTCAAGTAAATGCTTATAGCAGTGACTCTGCAAGTTTTGCAACTGATTTTGCCAATGCAATGGTTAAAATGGGGAACCTCAGCCCACTCACTGGCTCTAGTGGCCAGATTAGGACCAATTGCAGGAGGATCAACTGA 984 0.4248 MNIISIFKTRSLLLFLCFIGIVSAQLSSDFYSSTCPNVLSTIKTAVDSAVSNEARMGASLLRLHFHDCFVQASSLSLLFNGCDASVLLDDTSSFTGEQSAFPNVNSLRGFDVIDTIKSQVENLCPGVVSCADILAVAARDSVVALGGPSWTVPLGRRDSTTASLSSANSDLPGPASDLSDLISNFSNKGFTTNEMVALSGSHTIGQASCRNFRTRIYNETNIDSTFATSLQAKCPSTGGDGNLSPIDTTSPNTFDNAYFKNLQSQKGLFHSDQVLFNGGSTDSQVNAYSSDSASFATDFANAMVKMGNLSPLTGSSGQIRTNCRRIN. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01333 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Seca1g01333 327 FunFam Peroxidase 172 306 - -
Seca1g01333 327 PANTHER PEROXIDASE 72-RELATED 19 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 Pfam Peroxidase 43 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Seca1g01333 327 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 FunFam Peroxidase 29 180 - -
Seca1g01333 327 Gene3D Peroxidase, domain 2 172 306 - -
Seca1g01333 327 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601|GO:0042744
Seca1g01333 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01333 327 Gene3D - 29 324 - -
Seca1g01333 327 SUPERFAMILY Heme-dependent peroxidases 25 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01333 Seca-Chr1 19881637 19883901 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01333 21 327 Peroxidase AT5G05340 66.019 9.51e-149 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01333 K00430 - gmx:100815142 504.212