Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01331 ATGAATAACTTGAAAGTGATGATCAGTTTGTGGCTGTTAGCATGTCTTTTTGGCTTAGCTTCAGCTCAATTAAACCCCAATTTTTATTTATTATCATGTCCCTTGGCTGTTACTACCATTAAGACACAAGTCACCCTTGCTGTGCTAGCAGAGCCTCGCATGGGTGCATCCTTACTCCGTTTACATTTCCATGATTGCTTTGTCCAAGGGTGTGATGCATCAGTGTTGTTAAACGACACAGATACATTCATAGGTGAGAAGACAGCATTTCCAAACGTGAATTCATTGAGGGGTTTCGAAGTAATAGACAACATTAAATCCGTTATAGAAGCCTTATGCCCTGGTGTTGTTTCTTGCGCTGACATCTTAGCTGTTGCTGCACGAGACTCTGTTGTTGCTCTGGGTGGACCTAGTTGGACAGTGGGTTTAGGAAGAAGAGACTCAACGACTGCAAGTTTGGCCGGTGCTAATTCTGACTTGCCAGCTCCTTTCCTCAATCTCGATGGCCTAATCACTGCTTTTGCCAACAAAGGTTTCACGGCTAGTGAGATGGTTGCTTTGTCAGGTGCTCACACAATAGGCAAAGCAAGGTGTTTAACCTTCCGACAAAGGATTTACAACGACACCAACATAGATGCCTCATATGCGGCATCACTACAAGCAATTTGTCCCTTCACAGGTGGTGATGACAATTTAGCCCCTTTAGACACTACCACTCAGAACCTTTTCGACAATAAATACTACAGCAATTTGTTGAGTTCAAAAGGCCTCTTGCACTCAGACCAAGAGCTCTTCAATGGAGGTTCCGCAGATGCCCAAGTGCAAGATTATGTTTCCCACCCATTAAACTTCAGAGCAGATTTTGCTAATGCAATGGTTAAGATGGGCAACCTTAGCCCACTAACCGGCCAGAGTGGTCAGATAAGAACCAAATGCTACCAGGTCAATCAAGTCAACAATAATAAATAA 969 0.4355 MNNLKVMISLWLLACLFGLASAQLNPNFYLLSCPLAVTTIKTQVTLAVLAEPRMGASLLRLHFHDCFVQGCDASVLLNDTDTFIGEKTAFPNVNSLRGFEVIDNIKSVIEALCPGVVSCADILAVAARDSVVALGGPSWTVGLGRRDSTTASLAGANSDLPAPFLNLDGLITAFANKGFTASEMVALSGAHTIGKARCLTFRQRIYNDTNIDASYAASLQAICPFTGGDDNLAPLDTTTQNLFDNKYYSNLLSSKGLLHSDQELFNGGSADAQVQDYVSHPLNFRADFANAMVKMGNLSPLTGQSGQIRTKCYQVNQVNNNK. 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01331 322 Gene3D - 27 312 - -
Seca1g01331 322 PANTHER PEROXIDASE 72-RELATED 20 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 Pfam Peroxidase 42 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Seca1g01331 322 FunFam Peroxidase 27 168 - -
Seca1g01331 322 CDD secretory_peroxidase 23 312 IPR033905 GO:0004601|GO:0042744
Seca1g01331 322 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 FunFam Peroxidase 161 295 - -
Seca1g01331 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Seca1g01331 322 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 ProSiteProfiles Plant heme peroxidase family profile. 23 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g01331 322 Gene3D Peroxidase, domain 2 161 295 - -
Seca1g01331 322 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01331 Seca-Chr1 19736001 19738259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01331 19 316 Peroxidase AT5G05340 60.000 2.74e-132 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01331 K00430 - gmx:100815142 444.891