Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca1g01294 | ATGGGGAAAAAGGGTATATTCTTAACCCGCTCAAATGGGATAAATGAGCAATGGGCACAGTGTGACAACTGCTCAAAATGGAGGAAGTTGCCAGTTGATATACTTCTTCCCCCTAAGTGGACATGTGTTGAGAATATATGGGATCCGAGCAGGAGTACATGTTCTGCTCCAAATGAAATGAACCCAGAGGAACTGGATCATGTTACGAAAATGATCAAAGGTATTTATCCATTTCATTTAGTCACTGCTAATTTGTGA | 258 | 0.407 | MGKKGIFLTRSNGINEQWAQCDNCSKWRKLPVDILLPPKWTCVENIWDPSRSTCSAPNEMNPEELDHVTKMIKGIYPFHLVTANL. | 86 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca1g01294 | 85 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 | 1 | 73 | - | - | |
| Seca1g01294 | 85 | ProSiteProfiles | Zinc finger CW-type profile. | 12 | 62 | IPR011124 | GO:0008270 | |
| Seca1g01294 | 85 | Gene3D | - | 15 | 70 | - | - | |
| Seca1g01294 | 85 | Pfam | CW-type Zinc Finger | 17 | 59 | IPR011124 | GO:0008270 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca1g01294 | Seca-Chr1 | 18911535 | 18912079 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca1g01294 | 1 | 84 | B3 DNA Binding Superfamily | AT4G32010 | 51.190 | 1.24e-28 | 105 |