Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01257 ATGGCAAAGTCATTGAGGTCAAAGAGGGAGAAGAGGCTGAGGGCTTTTCGAAGGGAGATTGATGAGCCTTTCTATGACAAGAAAGAGGCTGCTAAGCTGGCTGCACAAGAAGCTGCTCTTGCTGCACCTAAGCTGCAGGTTGCTCCTCCATCAAACAATGCCATGGACGCTTCACTTCAACTGACAACAACAACAGCATGGAATCTATATTCACTTGGGGCAAGGAGAATTGGTGTGACATCATTAGCTCCAATAGGTTGCCTGCCAGCAGCCATCACTCTCTTTGGCTTTCATAGCAACGAATGTGTGGCCCAACTAAACAGTGTTGCTGTTAACTTTAACAAAAAGCTAAATATCACATCTCAGAGCTTGCAAAACTCTCTTCCTTGCTTCAAATTGGTCATTTTGGATATCCATCAACCTCTCTATGACCTTTGCACTAAGCCTTCTGAATATGGATTTTTTGAAGCAAGGAAGGGATGTTGTGCAACTGGTTTGCTAGAGGCAGGTCTATTGTGTAATCAGAAGTTCATAGGAACATGTGCCAATGCGAGTGAATATGTATTCTGGGATAGTGTTCATCCATCACAGGCTGCAAACAAGATTTTGGCTGATGATTTGCTCATTGCTGGCATCTCTCTCATATCCTAA 651 0.4378 MAKSLRSKREKRLRAFRREIDEPFYDKKEAAKLAAQEAALAAPKLQVAPPSNNAMDASLQLTTTTAWNLYSLGARRIGVTSLAPIGCLPAAITLFGFHSNECVAQLNSVAVNFNKKLNITSQSLQNSLPCFKLVILDIHQPLYDLCTKPSEYGFFEARKGCCATGLLEAGLLCNQKFIGTCANASEYVFWDSVHPSQAANKILADDLLIAGISLIS. 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01257 216 Gene3D SGNH hydrolase 29 210 IPR036514 -
Seca1g01257 216 Pfam GDSL-like Lipase/Acylhydrolase 63 206 IPR001087 GO:0016788
Seca1g01257 216 PANTHER GDSL ESTERASE/LIPASE EXL3 56 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01257 Seca-Chr1 18182520 18187018 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01257 59 204 Pollen Coat Proteome AT1G75930 35.849 8.67e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01257 - - gmx:100804640 242.276