Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01221 ATGGTGGATTTTATGGAAGAATCTACCTTGGAAATTATCAGAACATGGGAGAGGAGAATTACAGAAAGTGAAGGAGGGATTACAGAGATAGAGATTGATGTCGATCTGAAGGTTCTTACAGGGGATGTCATTTCAAAAGCTTGTTTTAGCAGCTCTTATGCACAAGGCAACCAAATATTTGCAAAATTGGCCACTATGCAAGATGCACTATCAAGGCCTAGCATTCTATTTGGATTTTTAAACCTAAGTTTTCTTCCCACCAAGGAAAACAAAGAGATACAAAAGTTGGAGAAAGAGGTGGACATGCTGATACTACAAATCATCAATGATCGTGAAGTACAAAACCAAAAGAATAGCATACAAAAGGATTTATTACAAACATTACTAGAAGGTGTTGCAAGTGATACCACATTAAATAGTAGTGGAAAGGGTATTTCCAACATGAAGAGAATGATTATCGACATATGCAAAAATATCTACTTTGCAGGCTCTGAGAGCAGTGCTATTGCAGTTAGTTGGACATTGTTGCTACTTGCCTTACATCCTGATTGGCAACAACGTGTTAGATCTGAGATTGTGGAGATTTATGATAACATATTGCCTCATTCTTTTCATGACATGGGCAAACTTCAAAAGTTAAAAGCACTAACAATGGTGATTCAAGAGAGTCTACGTCTTTATGGGCCTGCGGTTACAGCTTCAAGGGAAGTTTTGGCTGAGATGAAATTGGGGGAACTTGTGTTGCCTAAAGGCATAAACATGTGGTTATTCTTCCCAGCATTGCACCGTGACCCTGATAATTGGGGACCAAATGCTAGTGAGTTTAAGCCAGAAAGGTTTGTTGATGGTGTTTCTGCAGCCTGTAAGTATCCCCAAGCTTATATACCATTTGGCCTTGGGAGTCGACTTTGCTTAGGCCAAAACTTTGCTATGACTGAAATTAAGGTCATACTTTGTCTTCTTCTATCTAACTTCTCCTTTTCTCTTTCACCAAATTATCGCCATTGCCCTGTGTATAAAATGTTGTTAACGCCAAAATATGGTTTAAAGCTTCTTGTTAGCAAGGTTCATTAG 1074 0.3864 MVDFMEESTLEIIRTWERRITESEGGITEIEIDVDLKVLTGDVISKACFSSSYAQGNQIFAKLATMQDALSRPSILFGFLNLSFLPTKENKEIQKLEKEVDMLILQIINDREVQNQKNSIQKDLLQTLLEGVASDTTLNSSGKGISNMKRMIIDICKNIYFAGSESSAIAVSWTLLLLALHPDWQQRVRSEIVEIYDNILPHSFHDMGKLQKLKALTMVIQESLRLYGPAVTASREVLAEMKLGELVLPKGINMWLFFPALHRDPDNWGPNASEFKPERFVDGVSAACKYPQAYIPFGLGSRLCLGQNFAMTEIKVILCLLLSNFSFSLSPNYRHCPVYKMLLTPKYGLKLLVSKVH. 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01221 357 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 348 - -
Seca1g01221 357 SUPERFAMILY Cytochrome P450 2 353 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 Pfam Cytochrome P450 1 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 PRINTS P450 superfamily signature 295 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 PRINTS P450 superfamily signature 218 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 PRINTS P450 superfamily signature 162 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 PRINTS P450 superfamily signature 304 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 297 306 IPR017972 GO:0005506|GO:0016705
Seca1g01221 357 PRINTS E-class P450 group I signature 39 57 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 PRINTS E-class P450 group I signature 304 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 PRINTS E-class P450 group I signature 151 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 PRINTS E-class P450 group I signature 171 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 PRINTS E-class P450 group I signature 294 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 PRINTS E-class P450 group I signature 258 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01221 357 Gene3D Cytochrome P450 1 356 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01221 Seca-Chr1 17591365 17595819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01221 1 353 Cytochrome P450 AT5G24900 44.258 7.50e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01221 - - gmx:100801472 515.383