Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01211 ATGAGTCCAAAAATTTCAGATTTTGGTCTTGCAAGAATTGTCGCAATCGATCAAGATGAAGGAAGTACCAACAAAATTGTTGGAACATATGGTTATATGTCTCCAGAGTATGCAATGCTTGGACAATTTTCTGAGAAATCAAATGTTTTCAGTTTTGGAGTAATGGTTTTAGAGATTATCACGGGAAAAAAGAATGCAAGATCTTATGAATCATTTCGTAATGCTGATGGTCTCCTAAACTATGTTTGGAGACAATGGAGGGATCAAACACCATTGAATATATTGGACACAAAATTAAAAGAAAATTACTCTGAAATTCAAGTTATTAAATGCATTCAAATTGGTTTATTATGTGTTCAAGAAAACCCAGATGCTAGACCTACGATGGTCACAATTGTTTCTTATCTTAGTAATCACTCGATTGAATTGCCATCTCCCCAACAACCAGCATTTTTCTTAGAAGAAAGAATGGATCAAAGAATTATTGCACATGAATCAAGGTCCAACCAATCTCTTAACGGTTATGTATCATTCTCTATCAATGGAATGTCTATAAGTGAATTTCATCCTAGATAG 576 0.3368 MSPKISDFGLARIVAIDQDEGSTNKIVGTYGYMSPEYAMLGQFSEKSNVFSFGVMVLEIITGKKNARSYESFRNADGLLNYVWRQWRDQTPLNILDTKLKENYSEIQVIKCIQIGLLCVQENPDARPTMVTIVSYLSNHSIELPSPQQPAFFLEERMDQRIIAHESRSNQSLNGYVSFSINGMSISEFHPR. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01211 191 Gene3D Transferase(Phosphotransferase) domain 1 1 148 - -
Seca1g01211 191 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 187 - -
Seca1g01211 191 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g01211 191 Pfam Protein tyrosine and serine/threonine kinase 4 136 IPR001245 GO:0004672|GO:0006468
Seca1g01211 191 SUPERFAMILY Protein kinase-like (PK-like) 2 163 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01211 Seca-Chr1 17414515 17415355 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01211 1 191 Receptor kinase-like Gene Family AT4G23150 48.438 2.59e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca1g01211 PK_Tyr_Ser-Thr 9.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01211 - - aprc:113852296 302.753