Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01209 ATGAATCCAAAAATTTCAGATTTTGGTCTTGCAAGAATCGTCGAAATAGATCAAGATGAAGGAAGTACTAACAAAATTGTTGGAACATATGGTTATATGTCTCCAGAGTATGCAATGCTTGGACAATTTTCTGAGAAATCAGATGTTTTTAGTTTTGGAGTCATGGTTTTGGAGATTATAGCTGGAAGAAAGAATCTAGGTTCTTATGAATCATCTCGTCTTTTTAATGGTCTCCTAAGTTATGTTTGGAGACAGTGGAGGGATCAAACACCATTGAACATAGTGGACCCAAAACTGAAAGAAAATTATTCTAAAATTGAAGTCATTAGGTGCATTCAGATTGGTTTATTATGTGTTCAAGAAAATCCAGATGCTAGACCTACAATGGTGACAATTGTTTCATATCTTAGTAGTCACTCAATTGAATTGCCGTCTCCACAAGAACCAGCATTTTTCTTGGATGGTAGAATGGATCCAAAAATAGTTGCACTTGAAGCAAGTTCTAGTCAATCTGCTAATAGTTCCATACCATTCTCAACCAACAGCATGTCTATAAGTGAATTTCATCCTCGATAA 576 0.3524 MNPKISDFGLARIVEIDQDEGSTNKIVGTYGYMSPEYAMLGQFSEKSDVFSFGVMVLEIIAGRKNLGSYESSRLFNGLLSYVWRQWRDQTPLNIVDPKLKENYSKIEVIRCIQIGLLCVQENPDARPTMVTIVSYLSSHSIELPSPQEPAFFLDGRMDPKIVALEASSSQSANSSIPFSTNSMSISEFHPR. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01209 191 SUPERFAMILY Protein kinase-like (PK-like) 2 169 IPR011009 -
Seca1g01209 191 Gene3D Transferase(Phosphotransferase) domain 1 1 145 - -
Seca1g01209 191 MobiDBLite consensus disorder prediction 172 191 - -
Seca1g01209 191 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 14 141 - -
Seca1g01209 191 Pfam Protein tyrosine and serine/threonine kinase 4 136 IPR001245 GO:0004672|GO:0006468
Seca1g01209 191 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 187 - -
Seca1g01209 191 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01209 Seca-Chr1 17402094 17403664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01209 1 191 Receptor kinase-like Gene Family AT4G23150 51.832 9.77e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca1g01209 PK_Tyr_Ser-Thr 6.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01209 - - aprc:113852296 319.701