Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01191 ATGCTAAAATTTTTCAATGCTGATCTCAGCAACCCAGAGAGTTTCAATGAAGCAATTGAAGGGTGTATTGGGATATTCCACACTGCTACTCCAATGGATTTAGCAGTAAACGAGGCAGAGGAAGTAGTGACCAAAAGAACCATTGATGGAGCATTAGGTATTCTAAAAGCATGCCTAAATTCAAAGACAGTGAAGAGAGTTATTTATACTTCAAGTGCTTTTGCTGTTCACTGGCAGGGCAAAGAAGAAGAAGTGATGGATGAGAGTTATTGGAGAGTGATGAATTTTATTTTTAAATCTTTGAAGCCATATGCTTGGTCATATTCAATTTCTAAGACATTGGCAGAGAAGGCAGTTCTTGAATTTGGAGAACAACATGGATTGGATGTTGTGACTCTATTACCTAGTTTTGTTCCAAGCTTCCTGGCTCAATTTATACTGCACTGCCTTTATTATTTGCTAGCTATACCTCAAGCTCCTTATATGATTCTTAAATGTAAACAAATTGGTGCTGCAGATGACATGACTCCATTTGTTGCCTCTCGTTTCCATATGGTGCATGTAGATGATGTGGCTAGAGCACATATATTCCTGCTTGAGCATCCTGATCCAAAAGGAAGATATAATTGCTCACCATTCATTGCAACTTTGGAAGAAATGGCTGAATTTCTCTCATCCGAATACCCTGAATTTCAAATACCAACACTAGACGAACTGAAGAAGATTAAAGGTCCCAAGTTTCCAGATTTAACCTCGAAGAAACTGATGGATGCAGCCTTGGGGAAATGTTTGACGATACAACTCAATGCTGCATGGAAAAGGGTTATCTGTGAACCATGA 840 0.3881 MLKFFNADLSNPESFNEAIEGCIGIFHTATPMDLAVNEAEEVVTKRTIDGALGILKACLNSKTVKRVIYTSSAFAVHWQGKEEEVMDESYWRVMNFIFKSLKPYAWSYSISKTLAEKAVLEFGEQHGLDVVTLLPSFVPSFLAQFILHCLYYLLAIPQAPYMILKCKQIGAADDMTPFVASRFHMVHVDDVARAHIFLLEHPDPKGRYNCSPFIATLEEMAEFLSSEYPEFQIPTLDELKKIKGPKFPDLTSKKLMDAALGKCLTIQLNAAWKRVICEP. 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01191 279 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 255 - -
Seca1g01191 279 FunFam Dihydroflavonol reductase 1 276 - -
Seca1g01191 279 Gene3D - 1 276 - -
Seca1g01191 279 Pfam NAD dependent epimerase/dehydratase family 3 209 IPR001509 -
Seca1g01191 279 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 234 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01191 Seca-Chr1 17062070 17064041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01191 2 260 Monolignol Biosynthesis Gene Families AT2G02400 33.948 5.78e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01191 - K13265 gmx:102659875 354.755