Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01142 ATGGACTACCAATCACTTGTGCTAATGATTAGCTTTGTAAGTGCAAGCATTCTCATCTTCATACTAAGATTATCATACAACCAAATCCAAAAGTCTATTAAGCTTCCACCTGGGCCACGCCCATTTCCTATCATTGGAAATATATTTGATCTTGGCAAAAATCCACACAAGACACTCACCAAACTCTCTAAAATTTATGGACCTGTTATGAGTTTGAAACTAGGCAATATAACCACCATAGTAATCTCTTCTCCTCAAGAAGCAAAACAAGTGCTACAAGAGAATGGTCATGCCTTCTCTAATAGGACAGTCCCACATGCAATTTGTGCACTTGACCATCACAAATACTCAATTGTGTGGCTTCCCCCATCAACTCAATGGAGGAACCTTAGGAAAGCCTGTGCTACAAAAGTATTCTCCCCACAAATGCTTGACTCCACACAAATCCTTCGTCAACAAAAGGTGCATGAATTGTTGGATTATGTGAAGGAAAGATGCAAGAAAGGTGAGGTTGTGGATATTGGTAAAGCTGCTTTTACAACAATCCTTAATTCAATTTCAAACACTTTCTTCTCAATGAATTTGTCTCACTCTACATCTGATGAAAAGTCTCAAGAGTTTAAGAACATTATTTGGGGCATCATGGAAGAAACTGGGAGGCCTAATGTTGCAGACTTCTTTCCCATTCTCCATCCACTTGACCCACAACATGTTCATGCCAAGATGTCCAATTATTTCAAGAAATTAACTACGATTATTGATGGAATTATTGAGGAAAGAATGTATTCAAGAGTTTCAAAAACTGATTCCAAGGTGTGCAATGATGTGTTAGATTCATTTCTTAACAATGTTGAAGAAAATAATTCTCAATTGAGCCGCAAAGAGATGTTACATTTGTTCCTGGTTAGTACTTAA 915 0.3749 MDYQSLVLMISFVSASILIFILRLSYNQIQKSIKLPPGPRPFPIIGNIFDLGKNPHKTLTKLSKIYGPVMSLKLGNITTIVISSPQEAKQVLQENGHAFSNRTVPHAICALDHHKYSIVWLPPSTQWRNLRKACATKVFSPQMLDSTQILRQQKVHELLDYVKERCKKGEVVDIGKAAFTTILNSISNTFFSMNLSHSTSDEKSQEFKNIIWGIMEETGRPNVADFFPILHPLDPQHVHAKMSNYFKKLTTIIDGIIEERMYSRVSKTDSKVCNDVLDSFLNNVEENNSQLSRKEMLHLFLVST. 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01142 304 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 301 - -
Seca1g01142 304 Pfam Cytochrome P450 36 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01142 304 SUPERFAMILY Cytochrome P450 26 301 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01142 304 Gene3D Cytochrome P450 21 302 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01142 304 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01142 304 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g01142 304 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01142 Seca-Chr1 16171293 16172207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01142 4 301 Cytochrome P450 AT2G45550 39.203 3.45e-70 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01142 - - gmx:100809461 423.32