Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01135 GCGAGTGATGCTTCTCTTGCGGAGTTTCTCGCTGTCCGCAATGGTCTGGATGTGGCTTGGAAGTGTAATTTTAAATTTCTGATTTCTGAGAGTGATGCCAAGGAGGTGGTCAATGCAATCTACTCTTCTTGGGCTGCTACTCAAACATTCAACCTTGGCGATTATCTCATTTTCAATACGAACTCGAACCAGACGGTGATTCTTACATACAACAAGACCACCTACCTGAACTGCACCGCCGATGATTCCGACAACGGCACGTTCATATACAGCAGCGGAAGTGGCGGTTTTAACGAGGCGTTGACCATTCCCGTTCCGTTGACCATCGTGGGACCTAACTACTTCTTCTCCGACGCCAGCGACGGCGTTCAGTGCCAGCGAGGATTGGCCTTCGAGATCAACGTCCAGCGCGGCCTCGGCTTGCCGCCGAGCCTCAACCAGCCGCCGCCGCCACCGTACATCGAGCCGCCGGGTCCCGACACCGCTCAGTCTCCACCGATTACAGTGGCGCAGCCACCGAACAGCGGCGCGTTCGCGAGCCGCTCTGATGTGGCGGTTTACGGCTTCGCTGCGGCGTTGCTGCTGATGCAGTTTCGGTGA 600 0.56 ASDASLAEFLAVRNGLDVAWKCNFKFLISESDAKEVVNAIYSSWAATQTFNLGDYLIFNTNSNQTVILTYNKTTYLNCTADDSDNGTFIYSSGSGGFNEALTIPVPLTIVGPNYFFSDASDGVQCQRGLAFEINVQRGLGLPPSLNQPPPPPYIEPPGPDTAQSPPITVAQPPNSGAFASRSDVAVYGFAAALLLMQFR. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01135 199 Pfam Reverse transcriptase-like 3 47 IPR002156 GO:0003676|GO:0004523
Seca1g01135 199 Gene3D - 23 139 IPR008972 -
Seca1g01135 199 SUPERFAMILY Cupredoxins 40 136 IPR008972 -
Seca1g01135 199 ProSiteProfiles Phytocyanin domain profile. 1 137 IPR003245 GO:0009055
Seca1g01135 199 FunFam Early nodulin-like protein 18 29 138 - -
Seca1g01135 199 MobiDBLite consensus disorder prediction 143 163 - -
Seca1g01135 199 PANTHER BLUE COPPER PROTEIN 20 156 IPR039391 GO:0009055
Seca1g01135 199 MobiDBLite consensus disorder prediction 140 174 - -
Seca1g01135 199 Pfam Plastocyanin-like domain 38 128 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01135 Seca-Chr1 16058166 16059493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01135 32 170 Phytocyanin Superfamily AT1G08500 41.096 2.89e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01135 - - gmx:100783106 240.736