Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01128 ATGCAGGAGACAATTGAACGCTACCGTAGGCATACCAGAAGTGCTCAACCAGTGCCAAGATCAGATGAACAAAATATGCAGAATTTGAAGCAAGAAACAGCAAGCTTGATGAAGAAGATTGAACTTCTTGAAGCTTCAAAACGGAAACTCTTGGGAGATGGTTTGGGGTCATGCTCCTTAGAAGAACTTCAACAGATAGAACAGCAGTTGGAAAAGAGTGTAAGCACTGTTAGAGCAAGAAAGACTCAGGTTTACAAGGAACAGATTGATCAACTGAAAGAAAAGGTAAGTTGTGGTCATGGAGTTATAGTTGACAAGGTGGTTGAACTTGAATTTTATCTTGCATTTGATTTTGTAAAGTGCCAATGA 369 0.3957 MQETIERYRRHTRSAQPVPRSDEQNMQNLKQETASLMKKIELLEASKRKLLGDGLGSCSLEELQQIEQQLEKSVSTVRARKTQVYKEQIDQLKEKVSCGHGVIVDKVVELEFYLAFDFVKCQ. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01128 122 MobiDBLite consensus disorder prediction 1 26 - -
Seca1g01128 122 Pfam K-box region 22 96 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca1g01128 122 ProSiteProfiles K-box domain profile. 26 122 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca1g01128 122 MobiDBLite consensus disorder prediction 1 17 - -
Seca1g01128 122 Coils Coil 26 46 - -
Seca1g01128 122 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01128 Seca-Chr1 15865775 15870793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01128 1 96 MADS-box Gene Family AT2G45660 69.697 4.70e-41 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01128 - - gmx:100784678 160.999