Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01095 ATGCTGAAGCTGGCACAGCGAATGACGAACAACTTCTGTGCAGGAGTGTGTGCATCAACGGTTCACAAATGGAACAAACTGAACAACAACAACAGCGTGGGAGAAGACGTGAGAGTAATGACAAGGAAGAGCGTGGACGATCCAGGTGAGCCTCCAGGGATCGTTCTCAGTGCAGCAACCTCCGTTTGGCTCCCCGTTTCTCCACACAGACTCTTCGATTTCCTCCGCGACGAGAGGCTTCGAAGCGAGTGGGACATACTCTCCAATGGTGGACCAATGCAAGAGATGGCTCACATTGCCAAAGGACAAGACCATGCCAACTGTGTCTCCCTTCTTAGAGCCAGTGCTATCAATGCAAACCAGAGCAGCATGTTGATTTTGCAGGAGACATGCACAGACGCTTCAGGGTCGCTTGTGGTGTACGCACCGGTAGATATTCCAGCAATGCACGTTGTTATGAACGGTGGTGACTCGGCTTACGTGGCGCTTCTGCCATCGGGGTTCTCTATTGTTCCTGATGGATCCGGGAGTGGCGGTGGTGAGAATAACGGCGGCGCGTCGCAGCAGAGAGCGAGTGGGTCCCTTCTGACGGTGGCTTTTCAGATACTTGTGAATAGCCTCCCCACGGCGAAGCTCACGGTGGAGTCAGTGGAGACGGTGAACAACCTAATCTCGTGCACTGTCCAGAAGATAAAAGCAGCACTTCGCTGTGACAGCTGA 720 0.5333 MLKLAQRMTNNFCAGVCASTVHKWNKLNNNNSVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPHRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHANCVSLLRASAINANQSSMLILQETCTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFSIVPDGSGSGGGENNGGASQQRASGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALRCDS. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01095 239 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 235 IPR042160 -
Seca1g01095 239 SUPERFAMILY Bet v1-like 3 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01095 Seca-Chr1 15198928 15200393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01095 1 239 Homeobox Transcription Factor Family AT3G61150 76.735 5.68e-126 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01095 K09338 - gmx:100783614 420.624