Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01091 ATGACGAGTGATTCTGTTGTTACACAAAAAGCCCCATCCATGGATAATGAACTTGACTGGCAGCCTCAAATAGGCAAACTATTCAACACTTCGAAAGAGGCATGGGAATTTTGGAATGATTATGGTGGAAAAATTGGATTTAATGTTCGAAAGCAATATTTCAACAAAAATAAAGATGGAATGATTTTGAGTGCTAGATATGTATGTAGCAAAGAATGTTTTCGTAAGCTGGACAAAAGAAATGGCGTATCAACTAAACATCGACATCAAACAAGACCGAATGTCCTATAA 291 0.3574 MTSDSVVTQKAPSMDNELDWQPQIGKLFNTSKEAWEFWNDYGGKIGFNVRKQYFNKNKDGMILSARYVCSKECFRKLDKRNGVSTKHRHQTRPNVL. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01091 96 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 92 - -
Seca1g01091 96 Pfam FAR1 DNA-binding domain 36 93 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01091 Seca-Chr1 15088056 15088346 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g01091 FAR1 4.4e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01091 - - tpra:123886525 139.813