Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01072 ATGGATGAGAGAGGTGGCAGCAACGGTGGCGCCACCACAGGGCTCCTCCAGGAAATGGTGGAGGAGGGAAGTTGTGGTGGTGGTGGTGGTGATGGTTTAGAAAGGAACAGTGAGAGACCAAAAGAACCTTGGAAAGGAGAATATGTAAAGAGCTTAGTGTATGGAGGACTTGATGCTATTATCACTTGTTTTTCTCTCATTTCCTCCATCTCAGCTACCACTAGTTCCTCTGGGGATGTGCTGGTTCTTGGGTTTGCAAACCTAGTGGCAGATGCAATATCAATGGGGTTTGGTGACTTTGTGTCTGGTGGCTCTGAGCGGGATGTGATCATTGAGGAAAGAAGAGTGATAGAATGGGATATCATGAATCATAGGGGCAATGAACAAGCAGAGTTAGTCAGATACTATCAAGCTCTTGGAATGGACTATAATGATGCAACTATGGTTGTGAACATATTTGCAAAATACAATGACATCCTGGTGGACCAGAGAATGGTAGCTGACAAAGGAATGCTGCCAGCAGAGCAAGAAGTGAAACCTTGGAAGAATGCCCTTATTGAATCTGTTAAGTTTGTTAGTGCATGCCTTGTTTCTGCACTTGCCCTTGCTCTTCTTGGGGTGGCAAGGGCAAGGATTGCTGGTCAAAAAATGATGTTCTCCACAGCCATCACTCTTTTCACTGGTGTCATAGCTGCAGCTGCTGCTTATTTAGTAAGCTGGTCGCTAAAGCATATAGCAGGACTAGAAGGTTGA 753 0.4555 MDERGGSNGGATTGLLQEMVEEGSCGGGGGDGLERNSERPKEPWKGEYVKSLVYGGLDAIITCFSLISSISATTSSSGDVLVLGFANLVADAISMGFGDFVSGGSERDVIIEERRVIEWDIMNHRGNEQAELVRYYQALGMDYNDATMVVNIFAKYNDILVDQRMVADKGMLPAEQEVKPWKNALIESVKFVSACLVSALALALLGVARARIAGQKMMFSTAITLFTGVIAAAAAYLVSWSLKHIAGLEG. 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01072 250 MobiDBLite consensus disorder prediction 1 41 - -
Seca1g01072 250 Pfam VIT family 50 192 IPR008217 GO:0005384|GO:0030026
Seca1g01072 250 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 41 244 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01072 Seca-Chr1 14804308 14806273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01072 45 118 Nodulin-like Gene Family AT3G25190 32.000 1.12e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01072 K22736 - gmx:100776858 319.701