Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g01010 ATGGCTACATCTATTTTCAGCAGTGATGGCGCTCCCTGGGCGAAAAAGGATGAGGGAGAAACGAAAGAAGTGAAGAAGTGCGCCCTCAGTAGGATCGTTTCTCCCTCATCTTTTTCTGCCCATGGAGCGCCATCGCCGCTGAAAATAGATGCAGCCTTTGCTTACATTTCCAGTATTCTCAGATCCAGAATCGTTCCCAAATCACATATAAGGTTATTCGCGTTTGACCACCAGGTACCGCTGACTTGGATGACCCCTTCTACTTCAGCCGCAAGGTTGCGTGAAGGAATGATGCAGACTTTGACTTGCCATGCTCGGCGGGGTCTTAGCTTCAGACAACACTTTAGTCTTGAGAACAGACTTCACACTTCAGAAGATGATTCAGAACCAGTTACTTCAGAATGCCTTGAGCACTTCAGACAGGGCTTCCTTCAGAACCAAGAGAACGTTCACAACGTGTCGAATATATGGTTGTTGTTGATTCGAATTGGGGTGGGAGAAGAATTGTCGTCGATTCCAGATGAAATGTCAATAGAGGGGAAGTATTTTTTGGAGAAGTGTTTTGTGAAGGATCCAAAGAAAAGATGGAGTGTAGAGATGCTTTTGAAGCACCCACTTCAATTTCCCTCATTGGGCTTCTACTCTAATGACTTCGCTTCCCTCTGTACAAAGGAATGA 678 0.4558 MATSIFSSDGAPWAKKDEGETKEVKKCALSRIVSPSSFSAHGAPSPLKIDAAFAYISSILRSRIVPKSHIRLFAFDHQVPLTWMTPSTSAARLREGMMQTLTCHARRGLSFRQHFSLENRLHTSEDDSEPVTSECLEHFRQGFLQNQENVHNVSNIWLLLIRIGVGEELSSIPDEMSIEGKYFLEKCFVKDPKKRWSVEMLLKHPLQFPSLGFYSNDFASLCTKE. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g01010 225 Gene3D Transferase(Phosphotransferase) domain 1 103 210 - -
Seca1g01010 225 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 155 206 - -
Seca1g01010 225 SUPERFAMILY Protein kinase-like (PK-like) 144 207 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g01010 Seca-Chr1 14077439 14082121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g01010 154 206 MAP Kinase Kinase Kinase AT5G67080 64.151 2.81e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g01010 - - vum:124819620 89.3521