Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00985 ATGATTTACAAGCAAGATGTTGGAGAACAATTCAGGTTAGAGTATGCATGGAGATTGTTGAAAAATGAACCTAAATGGTCAAATGCGTCAGTTGAAGGAGGTAGCAAGAGAACAAAGATTTCTACAGGTGGGAATTACTCATCCTCTTCTAATCCCGAGTCGCCAATGACCAACGAGTACAACCCAACTTCACCCACTTTGGTTCGTCCAATGGGAACAAAGGCATCAAAAAGAAAGGGAAAATCTGTAGCACAAGAACCATCTGCTATCAACGAGGAACTATCTACAGTGACATCGTTAGAGAAGAAGAAAGTAGACAGTATTCTTGAAATGTCACGTGTCAAGGACGAACAAAACAAGTTGAAGAAACGAGAGTTAGACATGAAGGAGAGACAACTTGATAGAGAGTTCCTATTCCAGGATACATCTGCAATGACAGAGAGACAACTACAAGATCAAGCGATGATATGTAGAATGATAAGGGAAAAACATGGATGGTTGTAG 504 0.4028 MIYKQDVGEQFRLEYAWRLLKNEPKWSNASVEGGSKRTKISTGGNYSSSSNPESPMTNEYNPTSPTLVRPMGTKASKRKGKSVAQEPSAINEELSTVTSLEKKKVDSILEMSRVKDEQNKLKKRELDMKERQLDREFLFQDTSAMTERQLQDQAMICRMIREKHGWL. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00985 167 MobiDBLite consensus disorder prediction 28 70 - -
Seca1g00985 167 PANTHER - 2 162 - -
Seca1g00985 167 Pfam No apical meristem-associated C-terminal domain 10 149 IPR029466 -
Seca1g00985 167 MobiDBLite consensus disorder prediction 26 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00985 Seca-Chr1 13657126 13657629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00985 2 129 Glutathione S-transferase Gene Family AT5G41240 37.226 9.87e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00985 - - cam:101491527 200.675