Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca1g00889 | ATGTCCCCTACCAATTCTTCATCATCCCCACCCATCATGACTATCATCGATAACCTAGACACATTCACTAGGTTGTTCCTCTTAATTATCTTTCTTGCCCTCTTCATTCGAGTATGTTACGTTTACTTTTTCTCCTACCGTGGCCACAATCGTAACGACACATCAACACAACAAGGCAATGATAAAAACACCACCATGGGGCTCCCTATTGATGTCATCAATTCTTATCACACTTTCCCTTACACCAAAGACAACATTGCCACCATTAATTTTGACCATGACACCACATGTTGCATATGTATTTCAGATTATATGGAATCGGAGATGTTGAGGATGATGCCGCAATGTCATCACTATTTTCATCGAGATTGTGTTGATACATGGTTGAAGGTTAATGGGTCGTGTCCCATTTGTAGGAATTCGCCAATGTTGGAAGGTAGTAATGTGTCTAACTTAGATTGCGTCTAA | 468 | 0.4038 | MSPTNSSSSPPIMTIIDNLDTFTRLFLLIIFLALFIRVCYVYFFSYRGHNRNDTSTQQGNDKNTTMGLPIDVINSYHTFPYTKDNIATINFDHDTTCCICISDYMESEMLRMMPQCHHYFHRDCVDTWLKVNGSCPICRNSPMLEGSNVSNLDCV. | 156 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca1g00889 | 155 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 52 | 143 | IPR013083 | - | |
Seca1g00889 | 155 | SMART | ring_2 | 97 | 138 | IPR001841 | - | |
Seca1g00889 | 155 | SUPERFAMILY | RING/U-box | 89 | 142 | - | - | |
Seca1g00889 | 155 | ProSiteProfiles | Zinc finger RING-type profile. | 97 | 139 | IPR001841 | - | |
Seca1g00889 | 155 | PANTHER | RING-H2 FINGER PROTEIN ATL67 | 53 | 143 | IPR044289 | GO:0016567|GO:0016740 | |
Seca1g00889 | 155 | Pfam | Ring finger domain | 96 | 139 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca1g00889 | Seca-Chr1 | 11678025 | 11678492 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca1g00889 | 36 | 142 | C3H Transcription Factor Family | AT2G46495 | 37.383 | 5.80e-19 | 80.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca1g00889 | - | - | ccaj:109814695 | 178.718 |