Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00888 ATGGAGCAAATGTGTTTGGCTTGGGAAATGGAACTGCCAAAGGTGGTTCTCCTAAAGTCAGGCTTGCTGCTTACAAGGTCTGCTGGCCACCAATTGATGACAATGAGTGCTTTGATTCTGATATCTTGGCAGCCTTTGATACAGCTATATCTGATGGGGTTGATGTTCTTTCACTTTCTATTGGAGGGTCTCCTATGGATTACTTCAGTGATGCTATTGGCAATTGCTATTGGAACATTTCATGCCACTATGCATGGTATCACTGTAGCATGTGCTGGTGGAAATTCTGGACCAGGACCTGGAACTGTCTCAAATACTGCACCTTGGATCATTACAGTTGGTGCAAGTACCTTGGACAGAAAGTTTCAATCTATTGTTGAACTCTCCAATGGACAGGTTTTCAAGGGATATACTCTTTCAAATTCTGTGCCTGAAGACAAACTTTACCCACTCACTAGAGCTGAAATGGCCAAAAGGGATGAGGCAGAAGATTATGAAGCTGTGTTTTGTAAGACAGGAACAATTGATCTAGAGAAGGCCAAGGGCAAAATATTGGTTTGTCTTAGAGGTGACAATGCAAGAGCTGAAAAGAGCCTTGTTGCATTTGAGGCTGGTGCAGCTGGGATGATTCTTTACAATGATAAGTATAGCCCTGAAGACTATAAGCTCCTGGCTAGTCCTCATTTCCTTCCAACATCAGAAGTTACCTACAATGAGGGTCTTGCCATTTTATCCTACATCAATTCAACCATGTATCTCTCATTGATCCCTCTCTAA 777 0.4247 MEQMCLAWEMELPKVVLLKSGLLLTRSAGHQLMTMSALILISWQPLIQLYLMGLMFFHFLLEGLLWITSVMLLAIAIGTFHATMHGITVACAGGNSGPGPGTVSNTAPWIITVGASTLDRKFQSIVELSNGQVFKGYTLSNSVPEDKLYPLTRAEMAKRDEAEDYEAVFCKTGTIDLEKAKGKILVCLRGDNARAEKSLVAFEAGAAGMILYNDKYSPEDYKLLASPHFLPTSEVTYNEGLAILSYINSTMYLSLIPL. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00888 258 Gene3D Peptidase S8/S53 domain 74 118 IPR036852 GO:0004252|GO:0006508
Seca1g00888 258 Pfam PA domain 169 243 IPR003137 -
Seca1g00888 258 CDD PA_subtilisin_like 126 250 - -
Seca1g00888 258 SUPERFAMILY Subtilisin-like 69 142 IPR036852 GO:0004252|GO:0006508
Seca1g00888 258 SUPERFAMILY PA domain 162 251 IPR046450 -
Seca1g00888 258 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 74 249 IPR045051 -
Seca1g00888 258 Gene3D - 119 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00888 Seca-Chr1 11672414 11673411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00888 71 250 Subtilisin-like Serine Gene Family AT5G59810 53.333 1.18e-54 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00888 - - pvu:PHAVU_003G089100g 213.386