Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00885 ATGGGCTGTGTTGCAACTTTTGGCCCTCACAAAGGTTATGTTTCTGGATGGGAGTTTCTTCTGCAGTTTATGATGACCAACAGGTTCAGAAGTACTATAATCAACTCACAGGATGCACCATCTGCTGCACATTACACTTCAAGAGGTCCTTTACCTAGCTATCCTGGGGTCTTGAAGCCTGACATAGTGGCACCTGGCTCTAGAGTTCTTCCTTCTTTTGTTCCTCATAGATCAGCAACTAAAATTGGCACAAGATGTGTTCTTACCCTGTAA 273 0.4396 MGCVATFGPHKGYVSGWEFLLQFMMTNRFRSTIINSQDAPSAAHYTSRGPLPSYPGVLKPDIVAPGSRVLPSFVPHRSATKIGTRCVLTL. 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00885 90 Gene3D Peptidase S8/S53 domain 36 77 IPR036852 GO:0004252|GO:0006508
Seca1g00885 90 SUPERFAMILY Subtilisin-like 36 75 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00885 Seca-Chr1 11663779 11664051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00885 28 87 Subtilisin-like Serine Gene Family AT5G67090 43.333 1.84e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00885 - - gmx:100806072 80.8777