Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00875 ATGGTGATTGTGTCATTAATTATTTGCAGAGGTGAAGATATCTTTATTTCTGTCTGGAACCTTCATCGCAGTCCAACACTGTGGGATGGTGCTGACAAGTTTGAACCTGAAAGATGGCCATTAGATGGACCTAACCCTAATGAGACGAATCAAAATTTCAAATATCTACCATTTGGTGGAGGACCACGGAAATGTATAGGTGATATGTTTGCTTCATATGAGACTGTAGTAGCACTTGCAATGCTTGCTAGACGGTTCAACTTTCAAATGGCGATTGGAGCTCCACCAGTTGTGATGACTACTGGAGCTACAATTCATACAACACAAGGGTTGAACATGACTGTAACACACAGAATAAAGCCTCCTATTGTGCCCTCATTACAGATGTCAACATTGGAAGTGGATCCATCCATGAGCCTTTCTGATAAGGGTGAAATAAGTCAGAAAGGTGAAGTTTATCAGCCCCAGTCCTGA 474 0.4177 MVIVSLIICRGEDIFISVWNLHRSPTLWDGADKFEPERWPLDGPNPNETNQNFKYLPFGGGPRKCIGDMFASYETVVALAMLARRFNFQMAIGAPPVVMTTGATIHTTQGLNMTVTHRIKPPIVPSLQMSTLEVDPSMSLSDKGEISQKGEVYQPQS. 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00875 157 Gene3D Cytochrome P450 2 125 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00875 157 Pfam Cytochrome P450 7 101 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00875 157 SUPERFAMILY Cytochrome P450 7 118 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00875 157 MobiDBLite consensus disorder prediction 136 157 - -
Seca1g00875 157 PANTHER CYTOCHROME P450 FAMILY 4 7 117 - -
Seca1g00875 157 PRINTS E-class P450 group I signature 65 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00875 157 PRINTS E-class P450 group I signature 17 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00875 157 PRINTS E-class P450 group I signature 55 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00875 157 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 58 67 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00875 Seca-Chr1 11428709 11430351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00875 8 141 Cytochrome P450 AT1G31800 75.912 8.53e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00875 K15747 - gmx:100791400 278.485