Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00874 ATGGCTTCCCATATTGCTCTGCTTCATCCTCCTCCTCTTTCAATTCCCACTCAACGCTTCCAAAACAAACAGATTTGCATAAAGGGACTCAAACTCTCTACTTCTTCTTCTTGCTTTCCATGCTCCACAACAACTCAAAGAGGCTCTTGTTCATCAGTGATTGCATGTTCCTCTTCAAATGGCAGAAACCCGGATTCGGTGGATGATGGTGTCAAGAGCGTGGAACGCCTTCTTGAAGAGAAACGTAGAGCTGAATTGTCTGCTAAGATTGCCTCAGGAGGATTCACCGTGAACCAGCAATCTGGTTTACCTTCTAAATTGAAGAAGAGCTTGTCAAAGGTAGGGGTGCCCAATGAGGTTTTGGACTTTTTATTTGGTTGGGTTGAAGGGCGTGATGGGTACCCCAGAATTCCTGAGGCTAAAGGGTCAATCAAAGCCGTTCGAAGTGAGGCCTTCTTCATTCCCTTGTATGAACTTTACCTCACATATGGTGGGATTTTCAGGTTGACATTTGGACCAAAGTCCTTTTTGATAGTATCTGATCCATCTATTGCAAAACACATATTGAAAGACAATGCAAAGGCTTACTCAAAGGGTATCTTGGCTGAGATCCTAGACTTTGTAATGGGGAAAGGGCTCATCCCAGCTGATGGAGAAATATGGCGAGTTAGACGACGTGCTATTGTCCCAGCACTGCATCAGAAGTATGTAGCAGCTATGATTGGCCTTTTTGGACAAGCCACAGATAGGCTCTGCAAGAAGCTAGATGCTGCTGCATCTGATGGAGAAGATGTCGAGATGGAGTCACTTTTCTCTCGATTGACCTTGGACATCATTGGCAAGGCAGTATTCAATTATGATTTTGATTCTTTATCAAATGACACTGGTATAGTTGAGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTGCTCCAATTCCACTCTGGGAGATCCCAATATGGAAAGACATATCCCCACGTCAAAGGAAGGTTAATGCAGCTCTCAAATTGGTCAATGATACGCTTAATGATCTGATAGCAATATGCAAGAGAATGGTGGATGAGGAAGAGTTACAGTTTCATGAAGAGTACATGAATGAAAAGGATCCAAGTATTCTGCACTTCTTGTTGGCATCAGGAGATGATGTGTCAAGTAAGCAACTGCGTGATGACTTGATGACAATGCTCATTGCTGGACATGAAACATCAGCTGCCGTTTTGACTTGGACCTTTTATCTTCTGTCCAAGGAGCCTAGTGTCATGTCCAAGCTCCAAGAAGAGGTTGACTCTGTAATTGGTGATCGATTTCCAACTATTGAAGACTTGAAGAAACTCAAATATACAACTCGTGTGATCAATGAGGTATAA 1377 0.4306 MASHIALLHPPPLSIPTQRFQNKQICIKGLKLSTSSSCFPCSTTTQRGSCSSVIACSSSNGRNPDSVDDGVKSVERLLEEKRRAELSAKIASGGFTVNQQSGLPSKLKKSLSKVGVPNEVLDFLFGWVEGRDGYPRIPEAKGSIKAVRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILKDNAKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIGLFGQATDRLCKKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVAPIPLWEIPIWKDISPRQRKVNAALKLVNDTLNDLIAICKRMVDEEELQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVMSKLQEEVDSVIGDRFPTIEDLKKLKYTTRVINEV. 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00874 458 Pfam Cytochrome P450 155 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00874 458 SUPERFAMILY Cytochrome P450 149 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00874 458 Gene3D Cytochrome P450 133 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00874 458 PANTHER CYTOCHROME P450 FAMILY 4 158 457 - -
Seca1g00874 458 PRINTS E-class P450 group I signature 160 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00874 458 PRINTS E-class P450 group I signature 452 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00874 458 PRINTS E-class P450 group I signature 274 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00874 458 PRINTS E-class P450 group I signature 390 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00874 458 PRINTS E-class P450 group I signature 410 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00874 Seca-Chr1 11423949 11428158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00874 61 457 Cytochrome P450 AT1G31800 83.250 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00874 K15747 - gmx:100780770 759.214