Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00863 ATGGTTTCGCTCTCCACAAACCCCTTCTTTCCCCTCACTGCAAAAAACGCTTCTTCTTCTCTTTCTCCTTCTACTAGATTTCCACCTCCAAACAAGGCAAATCCACTCTATAAAAGCAATAAGCACACTAAGGATCACAGAAAGGTTGTCTGTGCTTGCATCGCTCCTCCGCGTAACTTCAACACCCATGACTCCTCCGCTATTAAATTCAATGGTTCATCCAAATCAGAACAATTAAACACGGTGCAGGATCATGAGGATGATTCTGGTGTTCTTATTGAATGTAGAGATGTCTACAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGATCAGGCATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACTGGCAAATCTACAGTTTTGAAGATTATAGCAGGACTTCTTGCTCCAGACAAGGGGGAAGTTTACATTCGAGGTAAAAGGAGAGTTGGTTTGGTAAGTGATGATGAGATAGATGGTCTTCGGATTGGATTGGTGTTCCAAAGTGCAGCACTTTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTATATGAACACTCAGGCATGTCTGAGGACCAGATATCAGAGCTTGTCAAGGAAAGCTTAGCAGCTGTTGGATTGAAGGGAGTTGAGGATCGGCTGCCTTCTGAGTTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATTTATGACACGACAAAGGATTCAATCGAGCCAGAGGTGTGTTAG 771 0.4267 MVSLSTNPFFPLTAKNASSSLSPSTRFPPPNKANPLYKSNKHTKDHRKVVCACIAPPRNFNTHDSSAIKFNGSSKSEQLNTVQDHEDDSGVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGKRRVGLVSDDEIDGLRIGLVFQSAALFDSLTVRENVGFLLYEHSGMSEDQISELVKESLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDTTKDSIEPEVC. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00863 256 Gene3D - 78 249 IPR027417 -
Seca1g00863 256 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 20 255 - -
Seca1g00863 256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 245 IPR027417 -
Seca1g00863 256 MobiDBLite consensus disorder prediction 15 41 - -
Seca1g00863 256 ProSitePatterns ABC transporters family signature. 228 242 IPR017871 GO:0005524|GO:0016887
Seca1g00863 256 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 93 255 IPR003439 GO:0005524
Seca1g00863 256 Pfam ABC transporter 108 243 IPR003439 GO:0005524
Seca1g00863 256 SMART AAA_5 117 249 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00863 Seca-Chr1 11187172 11189534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00863 99 243 Calmodulin-binding Proteins AT2G36910 30.625 4.90e-11 60.8