Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00847 ATGACGGGGAAGGCGAAGCCGAAGAAGCACACGGCGAAGGAGATCGCGGCGAAGGTCGACGCGGCGACGACGAACCGTGGCGGCGGAAAAGCTGGTCTTGCGGACCGTACGGGATCGGAGAAAGGAGGACACGCCAAGTACGAGTGTCCACACTGCAAAATTACAGCGCCTGATCTGAAATCGATGCAGATTCACCACGATGCTCGTCACCCAAAGATCCCTTTTGAAGAGGCCAAGCTTGTCAACCTTCACGCTAGTACCGCTGCGGATTCCTCCAAGCCTCGCCCTGGAGTTCGCGGTAGCCACAAGAAGTAA 315 0.5746 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGLADRTGSEKGGHAKYECPHCKITAPDLKSMQIHHDARHPKIPFEEAKLVNLHASTAADSSKPRPGVRGSHKK. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00847 104 MobiDBLite consensus disorder prediction 1 47 - -
Seca1g00847 104 PANTHER GEO09665P1-RELATED 1 83 IPR045230 -
Seca1g00847 104 MobiDBLite consensus disorder prediction 85 104 - -
Seca1g00847 104 SUPERFAMILY Expressed protein At2g23090/F21P24.15 29 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00847 Seca-Chr1 10978256 10978570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00847 1 104 C2H2 Transcription Factor Family AT3G02790 78.095 4.85e-56 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00847 - - zju:107412516 199.519