Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca1g00804 | ATGGAAGAAGATAACATCAATAACAGTAACAACAACAAAAACAACATCTGTGGTTATGAATTCTTTGTTTCTGATTCGAAAAGTGGAGACTTTCAAGGTTTTTCAGCCAAAAGAAGCATTGCTGAGAGAAGGGGTTTTAATTCCAATGCAGCAAGGATCAACACAGCGCTTTTTCGCACTGCACCTTCAACTTCAACAACCCCTTTGGCTTCTCCGGCAGCTAGATCACCTCGTCTCACCATTCCCCCTGGCATCAGCCCCACTGCATTGCTTGACTCTCCTATCATGCTCCCCAATTCTCAGGCCTTGCCATCTCCCACCACTGGAACTTTCCTCATGCTGCCACCTCTCACTCAAGAAGGATCAATGCTCACTTCTGAACAAGGGAATGTGGATGTGGCCCCTGCTTCTGATGCTGCTGACTCCTTCAAATTCAAACCTCATGCCAATTTGGATCCTAATTGTTCACCTGCCTACCATGCTTCTCTAAATCAGGTTTCTAGTAATTGCAACATGGTAAAGGGAGGAGATAGAGACAACCAACTACTTGCTCAAGTTCAACCACCATTAGATTTTTCATTCCCAGCAGATTTTCCAAATGGCTATTCTGCAAAAAAAAGTGAAGTCCATTCTTACAATGATGTGACAATGGTAAGTGATGCTATTGTTAATGCTAATACTGTTGAGATGCCAATGTCTCGTTCTGAGGAAGCTAGTGATGAAAGCACTCTGCCTGAAAATGCTATCCATGGTGAGAATATTGGACAACAACTTGCTTTAAAAGAACAGAAAGAGACATCCCATGCAACAGGAGTGATAAGGACCTCAGAGGATGGTTATAATTGGAGGAAATATGGACAAAAACAGGTAAAAGGTAGTGAATATCCCAGGAGCTACTATAAATGCACTCAGCCTAATTGTCATGTCAAGAAAAAGGTGGAAAGATCCCATGATGGCCAAATAACTGAAATTATTTACAAAAGTACTCATAACCATGCAAAACCAAATCCTAGCCGTCGAGCATCAGCACTTTCTACTGATGAGATGTCAGAAATTGTTGAAGCTGGTGAAACCAGTGGTAAAGTTGATGCTGATTCGGTCTGGGGAAATATTCAGTCAGGGATGAAAAATGCAAGATACAATATGGAATGGAAGACTGATGGTCAGGAAAGGACATCCTCAACTTCTGTTGTGACTGAGCTTTCAGATCCTATATCAACTAAGAAAGCTAAACCTCCATGTATGAATGAATCGGAGGATACTCCAGAGCTTTCTTCTACAAATGCTAGTCATTGTGGTGATGAAGATGGAGCCACTCAAGCAATTGTATCACTTGAAGATGATGCTGAAGATGATGAATCAGAGTCAAAAAGAAGGAAGAAGGAAAGCTACACAGTTGAATCAAATTTGTCTTCCAGGGCTGTTCGTGAGCCACGAGTGGTAGTCCAAATTGAGAGTGAAGTAGACATACTTGATGATGGTTATCGCTGGCGGAAGTATGGACAGAAGGTTGTCAAAGGAAATCCAAATCCCAGGAGCTACTACAAATGCACAAGTGCTGGATGTACTGTAAGGAAACATGTGGAAAGGGCTTCCCACAATCTAAAATATGTTGTTACTACTTATGAGGGAAAACATAATCATGAAGTGCCTACTGCTAGAACCAACAACCAGATAAGCTCAAATGATGGTGGCTTACCTCCCACTGGTGCTAATGGGCTTACATTACCCGGAAGTGCCAGTACTCCAAAGCCTGAAACTCGTCAAACTCTTGCTCCTCATTTTGATAGAAAACCTGAATTTAGCAATGAATTTCTCAGGCATGGTTTGGTTGGAAGTTTCAGTAATGATATGAAGTTTGGACCTTCCTCCATGTGCCAAATGAAGTATCCTTTGAATAATACCATGCCTTATGGCTCCTATACCGCCCCTCAAGCTGGATCCATTGCCTCAATGTTCCCTGGTCTTCCAATTCCACTGCCATTGAATCTTCCCTCATCTGGAAATTTTTCTCTAACTGGAATTAACTTTAACTGTGTAAAACCAATGGGTCCTGTGCAGTCTTTCCTTTCAGGGCAGCAGATGAAGGACATTGATACAGGGTTCCTAAGGCCTAAACAGGAGCAGAAGGATGATACTATGTATGGATCATGCATACCCTCTCTTGATCATGCAAATGCTTCACTCAATCCGTCAACATCACCATCCATTTATCAAAGTGTCATGCAAAATTTCCCTTCATAA | 2244 | 0.4198 | MEEDNINNSNNNKNNICGYEFFVSDSKSGDFQGFSAKRSIAERRGFNSNAARINTALFRTAPSTSTTPLASPAARSPRLTIPPGISPTALLDSPIMLPNSQALPSPTTGTFLMLPPLTQEGSMLTSEQGNVDVAPASDAADSFKFKPHANLDPNCSPAYHASLNQVSSNCNMVKGGDRDNQLLAQVQPPLDFSFPADFPNGYSAKKSEVHSYNDVTMVSDAIVNANTVEMPMSRSEEASDESTLPENAIHGENIGQQLALKEQKETSHATGVIRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCHVKKKVERSHDGQITEIIYKSTHNHAKPNPSRRASALSTDEMSEIVEAGETSGKVDADSVWGNIQSGMKNARYNMEWKTDGQERTSSTSVVTELSDPISTKKAKPPCMNESEDTPELSSTNASHCGDEDGATQAIVSLEDDAEDDESESKRRKKESYTVESNLSSRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKYVVTTYEGKHNHEVPTARTNNQISSNDGGLPPTGANGLTLPGSASTPKPETRQTLAPHFDRKPEFSNEFLRHGLVGSFSNDMKFGPSSMCQMKYPLNNTMPYGSYTAPQAGSIASMFPGLPIPLPLNLPSSGNFSLTGINFNCVKPMGPVQSFLSGQQMKDIDTGFLRPKQEQKDDTMYGSCIPSLDHANASLNPSTSPSIYQSVMQNFPS. | 748 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca1g00804 | 747 | Gene3D | WRKY domain | 478 | 544 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca1g00804 | 747 | FunFam | WRKY transcription factor 57 | 477 | 551 | - | - | |
Seca1g00804 | 747 | MobiDBLite | consensus disorder prediction | 387 | 403 | - | - | |
Seca1g00804 | 747 | MobiDBLite | consensus disorder prediction | 58 | 80 | - | - | |
Seca1g00804 | 747 | SUPERFAMILY | WRKY DNA-binding domain | 274 | 335 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca1g00804 | 747 | SUPERFAMILY | WRKY DNA-binding domain | 484 | 551 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca1g00804 | 747 | MobiDBLite | consensus disorder prediction | 546 | 589 | - | - | |
Seca1g00804 | 747 | ProSiteProfiles | WRKY domain profile. | 271 | 335 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca1g00804 | 747 | SMART | WRKY_cls | 276 | 334 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca1g00804 | 747 | SMART | WRKY_cls | 491 | 550 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca1g00804 | 747 | MobiDBLite | consensus disorder prediction | 452 | 466 | - | - | |
Seca1g00804 | 747 | ProSiteProfiles | WRKY domain profile. | 486 | 551 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca1g00804 | 747 | MobiDBLite | consensus disorder prediction | 419 | 434 | - | - | |
Seca1g00804 | 747 | MobiDBLite | consensus disorder prediction | 386 | 472 | - | - | |
Seca1g00804 | 747 | Gene3D | WRKY domain | 263 | 336 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca1g00804 | 747 | MobiDBLite | consensus disorder prediction | 58 | 73 | - | - | |
Seca1g00804 | 747 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 197 | 578 | IPR044810 | GO:0003700 | |
Seca1g00804 | 747 | Pfam | WRKY DNA -binding domain | 277 | 332 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca1g00804 | 747 | Pfam | WRKY DNA -binding domain | 492 | 549 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca1g00804 | 747 | FunFam | WRKY transcription factor | 262 | 336 | - | - | |
Seca1g00804 | 747 | MobiDBLite | consensus disorder prediction | 551 | 588 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca1g00804 | Seca-Chr1 | 10282029 | 10286369 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca1g00804 | 1 | 554 | WRKY Transcription Factor Family | AT5G56270 | 41.593 | 2.46e-101 | 325 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Seca1g00804 | WRKY | 9.6e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca1g00804 | K18835 | - | gmx:100800211 | 1045.42 |