Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00781 ATGCATACATTATACATTAATGTTAAGACCTTTATCCTTTCCAGAAGACCCTGGTGTGTGTGTGTGTGTGCATTTGCCACCCCATCATTCATGGATTCACTTTCGCTACTCCTCTCTTCTTATCCACTCTCCAAAACCCAGAAACTCTCTGCTTCCAAACCCTTCTCTCTTCTCTCAAACCATAATCTACCTTCTCCTCAACCCCATTTTTCCTCCACCAAGAAAACCCCACTTTCTGTACTTCAAACCCATTCTCCTAACTCACTCCAGAACCTTCGCTTGCTTTTCCAACACCAAAATCTCTTAGCAAAATCGTATTTTTCATTTGCCATGATTGACCTCTTCACCCCATTTCCATGCCTTGCTGTTGAAGCCTCATCAGCGCCCAGTTTGGTTGAGTCAGATGCTGGCAAAATCAACTTGGAAACAATCGTGGCTTCCATTGATGACTTTTTCAATCGATACCCTTTTTTCGTTGCTGGATGTACCTTCGTTTGGCTGGTTGTGATCCCTCTGGTAGAAGAGTATTTCAAGAAATGCAAGTTTGTGTCAGCCATTGATGCCTTCAGGAAGCTCAGGGATGACCCTGATTCTCAGCTCTTGGACATAAGGGACAGGAAGAACTTGAAGTTTCTGGGGTCACCCAATTTGAAAATGTTGAAGAAGGAAGTGGTGCAGGTTGAGTTCACTGAGGGAAATGAAGATGGGTTTGTGAAGAAGGTGTTGGAGAGGTTCAAGGATGCGCCAAACACTGTTATCTGTGTTTTGGACAGTTTCGAAGGTAATTCAATGAAAGTTGCCGAGTTACTATTTAACAATGGTTTCAAGGAGGCCTATGCAATCAAAGGTGGAGTTAGAGGTCAGCAAGGGTGGATGGCTATACAGGATACCCTTTTGCCTCCTCCTGTGCATATAAACCGAAGAAAAAAAACTAAAGCTTCACAAAATTTCAGTACAAATGGAAATGGAGCCATTCAGCAAAATGAAAGTAATAACGAGACTGCCTTATCCCCAGATATCCCTGCAGTTGGAAACCAAAAGACAGAAAATGGTCAGGTGAAAAGGTCTGCAGAGTCCAATCCGGAAATGAAAAATGGTTCAGTAGCTTCCTCTTCTCCCTATCCTAATTACCCAGATTTGAAGCCACCCTCATCTCCAACTCCATCAAAGCCAAAATAG 1179 0.4309 MHTLYINVKTFILSRRPWCVCVCAFATPSFMDSLSLLLSSYPLSKTQKLSASKPFSLLSNHNLPSPQPHFSSTKKTPLSVLQTHSPNSLQNLRLLFQHQNLLAKSYFSFAMIDLFTPFPCLAVEASSAPSLVESDAGKINLETIVASIDDFFNRYPFFVAGCTFVWLVVIPLVEEYFKKCKFVSAIDAFRKLRDDPDSQLLDIRDRKNLKFLGSPNLKMLKKEVVQVEFTEGNEDGFVKKVLERFKDAPNTVICVLDSFEGNSMKVAELLFNNGFKEAYAIKGGVRGQQGWMAIQDTLLPPPVHINRRKKTKASQNFSTNGNGAIQQNESNNETALSPDIPAVGNQKTENGQVKRSAESNPEMKNGSVASSSPYPNYPDLKPPSSPTPSKPK. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00781 392 Gene3D - 178 301 IPR036873 -
Seca1g00781 392 MobiDBLite consensus disorder prediction 310 392 - -
Seca1g00781 392 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 165 291 IPR036873 -
Seca1g00781 392 MobiDBLite consensus disorder prediction 312 374 - -
Seca1g00781 392 MobiDBLite consensus disorder prediction 376 392 - -
Seca1g00781 392 ProSiteProfiles Rhodanese domain profile. 194 300 IPR001763 -
Seca1g00781 392 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 49 302 IPR044240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00781 Seca-Chr1 10065506 10071581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00781 142 292 Sulfurtransferasese or Rhodanese AT4G01050 40.260 2.18e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00781 - - gmx:100815667 448.743