Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00779 ATGCAAGGTCTCTTCTTGTTCTTTTTGTTCTTCTCATGTGCACCTCAGCAATTAGTCTCCTTCAAACCCTTTCTCTTTCACAGCATCAACAATAGAAGGATTCTCCATGAACCCTTTGTACCATTGGACACTTTCCCTCCATCTGAACCACCAAAACCACCACCACCCTTTCCTTCTCCTCATTCAACCCCAAACCCCAAACACCCACTTTCCTCCACAACCACCACTCAAACCACCACCCCAACCACCACCATCACCACCAACACAGACCCATCGCCATTTTTCCCAAACTACCCTTCTTCACCTCCTCCTCCTTCTCCAATCACCTTTGCTTCCTTCCCTGCCAACATCTCCTCTCTCATTCTCCCTCACTCTCCTCAACCCACTTCCTCTCCCAACAAACTCCTCCCCGTCGCCCTCTCCGCCGCCGCCTGCGCCGCCGTCGCCGTAGCCATTTCCACCTTCATTTACTGCCGCCGGCGAAACCGTAACCGCCATTCCGCCGCCGATGACAAGGCTCTCCGTTCCGACAGCAACCTCGAACTGTTCCCGCGCAATGCCGAACCCTCCGCCGCCAGCCCCGAGTTCCTCTACCTCGGCACCGTCGTGAACTCGCGCGGAATCGACGACGCTCCTCGCGGCGGCGGTTCCATGCGTCGGAAAATGGAATCGCCGGAGCTCCGTCCTCTTCCGCCGCTAGCTCGTCTTCCGGAGCCTCCTCCTCCGCCGTCTCCGCCGCGTACTGACGCCGGCGATTCGGAGGAGGAAGACGAGGAGTTTTACTCGCCGAGAGGGTCGTCCTTAGGAGGCCGTGAGAGCTCCGGCGGAACGGAATCCATTTCCCGGCGAGTTTTTTCCGCCCGGAATTTCGCCGGAAGAAGCGACGTATCAAGCTCCGCTTCGTGCTCCTCCTCTTCTTCGGGGTCACCGGACCGGTCGCATTCCATCAACCTCTCGCCGGCGGCGAGTTTGAGTCCCCGGAGAACAGAACCCAAGTCACCGGAAATCACCTCACCTCAGAATGCAACTTTAGTATCATCACCAATTCGGAACCAACACGTGCAATCTTCTTGTTGTTCTTCTTCGTTCTCTTCACCGCGCTCAACACCAGAGAGAGCTTTTGGTGAAGAAGATGACACTCACTCTCCTTCACTGTCTCCACTTACCTTATCACACAACAGAGCTTTGGAGAAAAACCCAAATGGAGCATTGAATGCATGCACAAACCCATGTGCATCATCATTGTCATCACAAGAGAGAATTTTGGAGAAAAATGAAGATGAAGAACCATCACCACCACCACCACCACAACTACCAAGGCTATCTAATGCTTCTAGTGAAAGTAGAAAGTCTATATCTTCATCTTCAGCTTTTTCTCTACCCTCTTCACCGGAGAAGGTGATGCATCATCAAGGTTTTGATCAGTCTCCAAGAATGTCTAGTGTCTCTGATGGGTTAATGTTACCGGGTCTGTCATCACTGCCTCTGTCACCAGCACTACTTTCATCACCGGAAACAGAAAGAGGATTTAGTATTGGTAGTGATGTGTCTTTGCCACAAAGGAAACACTGGAACATTCCTCTGTTGTCAACAGCAACAACAACACCCTTTGGTCAATCAGCAACTGTTGTCAATGTTTTTGATCAAATTGAAGCATTTCCAGTTCCTTCACAGAGGAAACACTGGGAGATTCCAATTATTGCTCCATCACGGCCACCTCCGCCGCCGCCACCACCCCCTCCGGTGCAGCAGCAGAGGAAGCAGTGGGAAATGCAATTGCCAGATCCCTTAACACCTGTTGGTCAACCCATTTTGAGGCCACCGGAATTAGTACCTCCTTCTAGGCCTTTTGTGTTGCAAAAGCCAATAACTGATGTTTCCCCTGTTGAGTTGCCGGTGAGTTTGGGGGAAATTGAAGAGCCCTTGAAACCAAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGAACAAGCTCTGATCGTGAAATGGTGTGGGATCAGTTGAAGTCAAGCTCGTTTAAATTGAATGAGGAAATGATTGAAACATTGTTTGTAGTGAACACACCCAACCTAAAACCTAAGGATGCTACTCCACGCACTGTTCTTCTGCCTCAAAATCAGGAGGACAGAGTACTTGATCCTAAAAAGTCTCAAAATATTGCAATCTTGCTCAAAGCTCTTAATGTAACCATTGAGGAAGTGTGTGAAGCACTTTTAGAAGGTAGTACTGATACACTTGGAGCAGAACTACTTGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAAGAAGAACGGAAATTGAAGGAACATAAAGATGACTCACCAACCAAGCTTGATCTGGCTGAGAAATTTTTGAAGGCAGTGCTTGACATACCTTTCGCCTTTAAAAGGGTTGAAGCAATGCTTTACATGGTCAATTTTGAATCTGAAGTGGAGTATCTTACAAAATCCTTTCAAACTCTAGAGGCTGCCTGTGAAGAGTTGCGATATTGTAGAATGTTCTTGAAGCTTCTCGAGGCTGTACTTAAAACTGGGAACCGCATGAATGTGGGGACAAACCGTGGTGATGCACAGGCCTTCAAACTTGATACACTTCTCAAGCTGGCTGATGTCAAAGGTGCAGATGGGAAAACCACTCTACTGCATTTTGTTGTACAGGAAATTATTAGAACTGAAGGTGCTCGTCTCTCCGATACTACTCAAACTCCAAGCTCTACTTTGATTGAAGATGCCAAGTGTAGGAGGCTTGGCCTACAAGTTGTATCTAATCTGAGTTCAGAGCTAGCAAATGTGAAGAAAGCTGCTGGTATGGATTCTGAAGTTCTCAGCAGTGAAGTCTCTAAACTTACCAAAGGAATCGCAAACATCGCAGAGGTTGTGAAATTAAACCAAATGGCTGGATCAGATGAAAGCAATCAGAAATTCACAGAATCAATGAACAAATTCATTAGAATGGCTGAGGAGGAAATTCTAAAAATTAAAGCCCAAGAAAGTGTTGCAATGTCCCTTGTGAAGGAGATTACAGAGTATTTTCATGGGAACTTGGCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTTGTAAGAGACTTTTTAGCAGTTCTTGACAGAGTCTGCAAAGAAGTTGGTATGATAAATGAGAGAACCATGATTAGTTCAGCTCATAAATTTCCTGTTCCAGTTAATCCAATGCTTCCTCAACCCCTTCCTGGATTACATGGAAGGCAACAGTTGAATGACTCTTCAGATGATGATAGTCCATTTCCTTAG 3270 0.4725 MQGLFLFFLFFSCAPQQLVSFKPFLFHSINNRRILHEPFVPLDTFPPSEPPKPPPPFPSPHSTPNPKHPLSSTTTTQTTTPTTTITTNTDPSPFFPNYPSSPPPPSPITFASFPANISSLILPHSPQPTSSPNKLLPVALSAAACAAVAVAISTFIYCRRRNRNRHSAADDKALRSDSNLELFPRNAEPSAASPEFLYLGTVVNSRGIDDAPRGGGSMRRKMESPELRPLPPLARLPEPPPPPSPPRTDAGDSEEEDEEFYSPRGSSLGGRESSGGTESISRRVFSARNFAGRSDVSSSASCSSSSSGSPDRSHSINLSPAASLSPRRTEPKSPEITSPQNATLVSSPIRNQHVQSSCCSSSFSSPRSTPERAFGEEDDTHSPSLSPLTLSHNRALEKNPNGALNACTNPCASSLSSQERILEKNEDEEPSPPPPPQLPRLSNASSESRKSISSSSAFSLPSSPEKVMHHQGFDQSPRMSSVSDGLMLPGLSSLPLSPALLSSPETERGFSIGSDVSLPQRKHWNIPLLSTATTTPFGQSATVVNVFDQIEAFPVPSQRKHWEIPIIAPSRPPPPPPPPPPVQQQRKQWEMQLPDPLTPVGQPILRPPELVPPSRPFVLQKPITDVSPVELPVSLGEIEEPLKPKLKPLHWDKVRTSSDREMVWDQLKSSSFKLNEEMIETLFVVNTPNLKPKDATPRTVLLPQNQEDRVLDPKKSQNIAILLKALNVTIEEVCEALLEGSTDTLGAELLESLLKMAPSKEEERKLKEHKDDSPTKLDLAEKFLKAVLDIPFAFKRVEAMLYMVNFESEVEYLTKSFQTLEAACEELRYCRMFLKLLEAVLKTGNRMNVGTNRGDAQAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSDTTQTPSSTLIEDAKCRRLGLQVVSNLSSELANVKKAAGMDSEVLSSEVSKLTKGIANIAEVVKLNQMAGSDESNQKFTESMNKFIRMAEEEILKIKAQESVAMSLVKEITEYFHGNLAKEEAHPFRIFMVVRDFLAVLDRVCKEVGMINERTMISSAHKFPVPVNPMLPQPLPGLHGRQQLNDSSDDDSPFP. 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00779 1089 MobiDBLite consensus disorder prediction 44 94 - -
Seca1g00779 1089 PANTHER FORMIN-RELATED 6 1083 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Seca1g00779 1089 MobiDBLite consensus disorder prediction 267 284 - -
Seca1g00779 1089 SUPERFAMILY Formin homology 2 domain (FH2 domain) 572 1047 - -
Seca1g00779 1089 Gene3D Formin, FH2 domain 639 1044 IPR042201 -
Seca1g00779 1089 SMART it6_source 636 1050 IPR015425 -
Seca1g00779 1089 ProSiteProfiles Formin homology-2 (FH2) domain profile. 636 1061 IPR015425 -
Seca1g00779 1089 MobiDBLite consensus disorder prediction 382 419 - -
Seca1g00779 1089 MobiDBLite consensus disorder prediction 1074 1089 - -
Seca1g00779 1089 MobiDBLite consensus disorder prediction 1065 1089 - -
Seca1g00779 1089 MobiDBLite consensus disorder prediction 441 462 - -
Seca1g00779 1089 MobiDBLite consensus disorder prediction 567 584 - -
Seca1g00779 1089 MobiDBLite consensus disorder prediction 566 587 - -
Seca1g00779 1089 MobiDBLite consensus disorder prediction 66 94 - -
Seca1g00779 1089 MobiDBLite consensus disorder prediction 230 248 - -
Seca1g00779 1089 MobiDBLite consensus disorder prediction 207 484 - -
Seca1g00779 1089 MobiDBLite consensus disorder prediction 44 65 - -
Seca1g00779 1089 MobiDBLite consensus disorder prediction 291 369 - -
Seca1g00779 1089 Pfam Formin Homology 2 Domain 641 1035 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00779 Seca-Chr1 10022713 10027781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00779 597 1077 FH2 protein (formin) Gene Family AT3G25500 73.265 0.0 706