Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca1g00779 | ATGCAAGGTCTCTTCTTGTTCTTTTTGTTCTTCTCATGTGCACCTCAGCAATTAGTCTCCTTCAAACCCTTTCTCTTTCACAGCATCAACAATAGAAGGATTCTCCATGAACCCTTTGTACCATTGGACACTTTCCCTCCATCTGAACCACCAAAACCACCACCACCCTTTCCTTCTCCTCATTCAACCCCAAACCCCAAACACCCACTTTCCTCCACAACCACCACTCAAACCACCACCCCAACCACCACCATCACCACCAACACAGACCCATCGCCATTTTTCCCAAACTACCCTTCTTCACCTCCTCCTCCTTCTCCAATCACCTTTGCTTCCTTCCCTGCCAACATCTCCTCTCTCATTCTCCCTCACTCTCCTCAACCCACTTCCTCTCCCAACAAACTCCTCCCCGTCGCCCTCTCCGCCGCCGCCTGCGCCGCCGTCGCCGTAGCCATTTCCACCTTCATTTACTGCCGCCGGCGAAACCGTAACCGCCATTCCGCCGCCGATGACAAGGCTCTCCGTTCCGACAGCAACCTCGAACTGTTCCCGCGCAATGCCGAACCCTCCGCCGCCAGCCCCGAGTTCCTCTACCTCGGCACCGTCGTGAACTCGCGCGGAATCGACGACGCTCCTCGCGGCGGCGGTTCCATGCGTCGGAAAATGGAATCGCCGGAGCTCCGTCCTCTTCCGCCGCTAGCTCGTCTTCCGGAGCCTCCTCCTCCGCCGTCTCCGCCGCGTACTGACGCCGGCGATTCGGAGGAGGAAGACGAGGAGTTTTACTCGCCGAGAGGGTCGTCCTTAGGAGGCCGTGAGAGCTCCGGCGGAACGGAATCCATTTCCCGGCGAGTTTTTTCCGCCCGGAATTTCGCCGGAAGAAGCGACGTATCAAGCTCCGCTTCGTGCTCCTCCTCTTCTTCGGGGTCACCGGACCGGTCGCATTCCATCAACCTCTCGCCGGCGGCGAGTTTGAGTCCCCGGAGAACAGAACCCAAGTCACCGGAAATCACCTCACCTCAGAATGCAACTTTAGTATCATCACCAATTCGGAACCAACACGTGCAATCTTCTTGTTGTTCTTCTTCGTTCTCTTCACCGCGCTCAACACCAGAGAGAGCTTTTGGTGAAGAAGATGACACTCACTCTCCTTCACTGTCTCCACTTACCTTATCACACAACAGAGCTTTGGAGAAAAACCCAAATGGAGCATTGAATGCATGCACAAACCCATGTGCATCATCATTGTCATCACAAGAGAGAATTTTGGAGAAAAATGAAGATGAAGAACCATCACCACCACCACCACCACAACTACCAAGGCTATCTAATGCTTCTAGTGAAAGTAGAAAGTCTATATCTTCATCTTCAGCTTTTTCTCTACCCTCTTCACCGGAGAAGGTGATGCATCATCAAGGTTTTGATCAGTCTCCAAGAATGTCTAGTGTCTCTGATGGGTTAATGTTACCGGGTCTGTCATCACTGCCTCTGTCACCAGCACTACTTTCATCACCGGAAACAGAAAGAGGATTTAGTATTGGTAGTGATGTGTCTTTGCCACAAAGGAAACACTGGAACATTCCTCTGTTGTCAACAGCAACAACAACACCCTTTGGTCAATCAGCAACTGTTGTCAATGTTTTTGATCAAATTGAAGCATTTCCAGTTCCTTCACAGAGGAAACACTGGGAGATTCCAATTATTGCTCCATCACGGCCACCTCCGCCGCCGCCACCACCCCCTCCGGTGCAGCAGCAGAGGAAGCAGTGGGAAATGCAATTGCCAGATCCCTTAACACCTGTTGGTCAACCCATTTTGAGGCCACCGGAATTAGTACCTCCTTCTAGGCCTTTTGTGTTGCAAAAGCCAATAACTGATGTTTCCCCTGTTGAGTTGCCGGTGAGTTTGGGGGAAATTGAAGAGCCCTTGAAACCAAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGAACAAGCTCTGATCGTGAAATGGTGTGGGATCAGTTGAAGTCAAGCTCGTTTAAATTGAATGAGGAAATGATTGAAACATTGTTTGTAGTGAACACACCCAACCTAAAACCTAAGGATGCTACTCCACGCACTGTTCTTCTGCCTCAAAATCAGGAGGACAGAGTACTTGATCCTAAAAAGTCTCAAAATATTGCAATCTTGCTCAAAGCTCTTAATGTAACCATTGAGGAAGTGTGTGAAGCACTTTTAGAAGGTAGTACTGATACACTTGGAGCAGAACTACTTGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAAGAAGAACGGAAATTGAAGGAACATAAAGATGACTCACCAACCAAGCTTGATCTGGCTGAGAAATTTTTGAAGGCAGTGCTTGACATACCTTTCGCCTTTAAAAGGGTTGAAGCAATGCTTTACATGGTCAATTTTGAATCTGAAGTGGAGTATCTTACAAAATCCTTTCAAACTCTAGAGGCTGCCTGTGAAGAGTTGCGATATTGTAGAATGTTCTTGAAGCTTCTCGAGGCTGTACTTAAAACTGGGAACCGCATGAATGTGGGGACAAACCGTGGTGATGCACAGGCCTTCAAACTTGATACACTTCTCAAGCTGGCTGATGTCAAAGGTGCAGATGGGAAAACCACTCTACTGCATTTTGTTGTACAGGAAATTATTAGAACTGAAGGTGCTCGTCTCTCCGATACTACTCAAACTCCAAGCTCTACTTTGATTGAAGATGCCAAGTGTAGGAGGCTTGGCCTACAAGTTGTATCTAATCTGAGTTCAGAGCTAGCAAATGTGAAGAAAGCTGCTGGTATGGATTCTGAAGTTCTCAGCAGTGAAGTCTCTAAACTTACCAAAGGAATCGCAAACATCGCAGAGGTTGTGAAATTAAACCAAATGGCTGGATCAGATGAAAGCAATCAGAAATTCACAGAATCAATGAACAAATTCATTAGAATGGCTGAGGAGGAAATTCTAAAAATTAAAGCCCAAGAAAGTGTTGCAATGTCCCTTGTGAAGGAGATTACAGAGTATTTTCATGGGAACTTGGCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTTGTAAGAGACTTTTTAGCAGTTCTTGACAGAGTCTGCAAAGAAGTTGGTATGATAAATGAGAGAACCATGATTAGTTCAGCTCATAAATTTCCTGTTCCAGTTAATCCAATGCTTCCTCAACCCCTTCCTGGATTACATGGAAGGCAACAGTTGAATGACTCTTCAGATGATGATAGTCCATTTCCTTAG | 3270 | 0.4725 | MQGLFLFFLFFSCAPQQLVSFKPFLFHSINNRRILHEPFVPLDTFPPSEPPKPPPPFPSPHSTPNPKHPLSSTTTTQTTTPTTTITTNTDPSPFFPNYPSSPPPPSPITFASFPANISSLILPHSPQPTSSPNKLLPVALSAAACAAVAVAISTFIYCRRRNRNRHSAADDKALRSDSNLELFPRNAEPSAASPEFLYLGTVVNSRGIDDAPRGGGSMRRKMESPELRPLPPLARLPEPPPPPSPPRTDAGDSEEEDEEFYSPRGSSLGGRESSGGTESISRRVFSARNFAGRSDVSSSASCSSSSSGSPDRSHSINLSPAASLSPRRTEPKSPEITSPQNATLVSSPIRNQHVQSSCCSSSFSSPRSTPERAFGEEDDTHSPSLSPLTLSHNRALEKNPNGALNACTNPCASSLSSQERILEKNEDEEPSPPPPPQLPRLSNASSESRKSISSSSAFSLPSSPEKVMHHQGFDQSPRMSSVSDGLMLPGLSSLPLSPALLSSPETERGFSIGSDVSLPQRKHWNIPLLSTATTTPFGQSATVVNVFDQIEAFPVPSQRKHWEIPIIAPSRPPPPPPPPPPVQQQRKQWEMQLPDPLTPVGQPILRPPELVPPSRPFVLQKPITDVSPVELPVSLGEIEEPLKPKLKPLHWDKVRTSSDREMVWDQLKSSSFKLNEEMIETLFVVNTPNLKPKDATPRTVLLPQNQEDRVLDPKKSQNIAILLKALNVTIEEVCEALLEGSTDTLGAELLESLLKMAPSKEEERKLKEHKDDSPTKLDLAEKFLKAVLDIPFAFKRVEAMLYMVNFESEVEYLTKSFQTLEAACEELRYCRMFLKLLEAVLKTGNRMNVGTNRGDAQAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSDTTQTPSSTLIEDAKCRRLGLQVVSNLSSELANVKKAAGMDSEVLSSEVSKLTKGIANIAEVVKLNQMAGSDESNQKFTESMNKFIRMAEEEILKIKAQESVAMSLVKEITEYFHGNLAKEEAHPFRIFMVVRDFLAVLDRVCKEVGMINERTMISSAHKFPVPVNPMLPQPLPGLHGRQQLNDSSDDDSPFP. | 1090 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca1g00779 | 1089 | MobiDBLite | consensus disorder prediction | 44 | 94 | - | - | |
| Seca1g00779 | 1089 | PANTHER | FORMIN-RELATED | 6 | 1083 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
| Seca1g00779 | 1089 | MobiDBLite | consensus disorder prediction | 267 | 284 | - | - | |
| Seca1g00779 | 1089 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 572 | 1047 | - | - | |
| Seca1g00779 | 1089 | Gene3D | Formin, FH2 domain | 639 | 1044 | IPR042201 | - | |
| Seca1g00779 | 1089 | SMART | it6_source | 636 | 1050 | IPR015425 | - | |
| Seca1g00779 | 1089 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 636 | 1061 | IPR015425 | - | |
| Seca1g00779 | 1089 | MobiDBLite | consensus disorder prediction | 382 | 419 | - | - | |
| Seca1g00779 | 1089 | MobiDBLite | consensus disorder prediction | 1074 | 1089 | - | - | |
| Seca1g00779 | 1089 | MobiDBLite | consensus disorder prediction | 1065 | 1089 | - | - |
Showing 1 to 10 of 19 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca1g00779 | - | - | vun:114185313 | 1100.89 |
Showing 1 to 1 of 1 entries