Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00766 ATGTTATCAGAGTTGATGAACTATTTGACAGCCTGCTTTAGGCCTAGTTTGGATCGATATGCACGCAGTGGTACAGATGCTGGAGGTAAACAAGATGGACTCTTGTGGTACAAAGACTCAGGGAGGCACTTGAATGGTGAGTTTTCAATGGCTGTGGTCCAAGCCAACAACTTGCTGGAGGATCAAAGCCATATTGAATCAGGGAGTTTGAGCTCCAGTGATTCTGGGCCTTGTGGTACCTTTATTGGTGTCTATGATGGGCATGGAGGACCTGAGACATCACGGTTTATCAATAATCACCTAGTTAACCATCTCAAGAGGTTTACTTCAGAGCAACAATCAATGTCTGTGGATGTAATTCGCAAGGCAATCCAAGCAACGGAAGATGGATTTACGTCCGTTGTTGCCAAACAGTGGTCAATGAAACCACAAATTGCAGCTGTTGGATCATGCTGTCTTGTTGGTGTAATTTGTAATGGAACCCTTTATGTAGCAAATCTTGGTGATTCCCGGGCTGTTTTGGGAAGAGCAGTCAAGGCAACTGGGGAGGTTTTAGCTGTGCAATTGTCAACAGAGCATAATGCAGCAATAGAGTCTATAAGACAAGAGCTGCATTCTTTGCACCCTGATGATTCAAACATTGTTGTTTTGAAGCATAATGTATGGCGTGTGAAGGGACTAATACAAGTTTCTAGATCTATTGGTGATGTATATCTGAAAAAGGCTGAATTCAATAGAGAACCACTATATGCAAAGTTTCGACTTCGTGAGCCAATCAAGAGGCCAATATTGAGTTCAGAACCATCGATATCAGTACACCAGTTGCAGCCACATGATCGGTTTATTATATTTGCTTCTGATGGGCTTTGGGAGCACCTAAGCAATCAAGAAGCAGTTGATATAGTTCAAAATAATCCCCACTCTGGAATTGCAAGGAGGCTTGTAAAAACTGCACTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACTTAAAAAAAATTGACCGTGGGGTCCGTCGGCATTTCCATGATGATATCACAGTAATTGTTGTGTTTATAGACTCAAATCTTGTGAGTAGGGCAAGCACTGTGAAATTCCCTACTATATCTGTTCGAGGGGGTGGTATCAATCTTCCTCCTAACACACTGGCACCTTGTACTACACCAACAGAGGCTGGTGCTACCTGA 1194 0.4263 MLSELMNYLTACFRPSLDRYARSGTDAGGKQDGLLWYKDSGRHLNGEFSMAVVQANNLLEDQSHIESGSLSSSDSGPCGTFIGVYDGHGGPETSRFINNHLVNHLKRFTSEQQSMSVDVIRKAIQATEDGFTSVVAKQWSMKPQIAAVGSCCLVGVICNGTLYVANLGDSRAVLGRAVKATGEVLAVQLSTEHNAAIESIRQELHSLHPDDSNIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPIKRPILSSEPSISVHQLQPHDRFIIFASDGLWEHLSNQEAVDIVQNNPHSGIARRLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFIDSNLVSRASTVKFPTISVRGGGINLPPNTLAPCTTPTEAGAT. 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00766 397 CDD PP2Cc 48 355 IPR001932 -
Seca1g00766 397 Pfam Protein phosphatase 2C 63 324 IPR001932 -
Seca1g00766 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Seca1g00766 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Seca1g00766 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Seca1g00766 397 Gene3D - 37 365 IPR036457 -
Seca1g00766 397 FunFam Phosphatase 2C family protein 36 365 - -
Seca1g00766 397 SMART PP2C_4 39 353 IPR001932 -
Seca1g00766 397 PANTHER PROTEIN PHOSPHATASE 38 353 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00766 Seca-Chr1 9829375 9833674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00766 1 396 PP2C-type Phosphatase Gene Family AT4G38520 74.242 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00766 - K01102 zju:107427407 691.804