Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00733 ATGGGTCGCTCCATTTTATACCTTCACCTTCTTGTTTCATCTTTTCTCACTTTCACTTTGTTGCTGAATGCTGTTCATGCCAGCAAAAAGTGCTACATTGTATACTTGGGAGCACATTCTCATGGTCCAACCCCTTCCTCTATTGACATTGAAACTGCCACATCTTCTCATTATGATTTATTGGGCTCAATCTTAGGAAGCCATGAGAGAGCAAAAGAAGCAATTATTTATTCATATAATAGACACATCAATGGCTTTGCAGCTCTACTTGAAGAGGAAGAAGCATCAGATCTTGCAAAAAACCCAAAAGTAGTGTCTGTGTTCTTGAGCAAAGAGCATAAACTGCACACTACTCGTTCATGGGAGTTCCTTGGACTTGGACTAAATGGAAATGGTGCCAACTCAGCATGGCAAAAGGGAAGATTTGGTGAAAATACAATTATTGCTAACATTGATACAGGTGTTTGGCCTGAATCACAGAGTTTTAGTGACAGAGGAATAGGCCCTGTTCCAGCAAAGTGGCGTGGGGGAAACATCTGTCAAATTAACAAACTCCGCGGTTCTAAGAAAGCTCCATGTAACAGGAAGCTAATTGGTGCAAGATTCTTCAACAAAGCTTATGAAGCATTTAACGGCAAACTTCATCCATCACAACAAACAGCACGTGACTTTGTAGGCCATGGTACCCACACACTATCAATAGCTGGTGGAAACTTTGTTCCAAATGCAAGTGTATTTGGAAATGGCAATGGTACAGCAAAAGGTGGATCCCCAAGAGCTAGAGTTGCAGCCTATAAAGTGTGTTGGTCTCTAACAGATGCAGCAAGTTGTTTTGGTGCTGATGTGTTAGCTGCTATTGATCAAGCCATAAGTGATGGTGTTGATGTCATCTCTGTTTCTGCTGGAGGCAGAGATGTCCTTAGTCCTCAAGAAATTTTCACAGATGAGGTTTCCATTGGAGCATTCCATGCACTTTCTAGCAACATATTATTAATTGCCTCTGCAGGGAATGAAGGACCAACACCTGGAACTGTTTTGAATGTGCCTCCTTGGGTTTTCACAGTGGCTGCTAGCACAATAGATAGGGACTTCAGTAGTACTTTAACATTTGGTAACAATCAACAAGTCACGGGAGCAAGTCTTTTTGTAAACTTGCCACCTAATCAGTCCTTTTCTCTAATCCTTTCTACCGATGCTAAACTTTCCAATGCTACAAGACGAGATGCTCAACTTTGCAAGCCTGGAACGCTTGATCCAACAAAAGTAATCGGAAAAATAGTGGCATGTGATCGAGAAGGGAAAATAAAATCAGTTGCTGAAGGTCAAGAAGCTCTATCTGCAGGTGCACAGGGAATGATTTTGGGAAATCAGAAGCAAAATGGGAATACTCTGCTTTCTGAGCCTCATGTTCTGTCTACTGTCAACTATGTAAAAAAACCTATAAAAACAAGGCCTGCTCGTTTTGACATAACTGCAACGTATATATATATCCTAATTCTCATGGACTCTACAATAAATTCAAATACTACAATAAGGTTGACCCAAGCAAAAACTTTCCTTGGAACAAGGCCAGCTCCAGTTATGGCTTCATTTTCATCTAGAGGACCTAATAAGATTCAACCATCAATACTCAAGCCTGACGTAACTGCCCCTGGTGTGAACATACTTGCTGCCTATTCACTATTTGCAACAGCATCTAACTTACCATCAGATACTCGTCGAGGTTTTCCATTCAATGTGTTGCAAGGAACTTCTATGTCTTGTCCTCATGTTGCTGGCATTGCTGGACTTCTCAAAACACTTCATCCTGATTGGAGTCCAGCAGCTATTAAATCTGCAATCATGACCACAGCAAGCACAAGAGATAACACTAACAAGCCGATACGCGATGCATTTGATAAAACATTGGCAACTCCATTTGCTTATGGTTCAGGACATGTTCAACCTAACAGTGCAATAGATCCTGGGCTTGTTTACGATATAAGCGTCATGGATTACTTGAACTTCTTATGTGCTTCTGGATATGACCAACAACTCATTTCCGCACTTAATTTCAACAAGACATTCATTTGTTTAGGATCTCATAGCATAACAGACTTGAACTATCCTTCAATCACATTACCAAATCTCGGGTTAAATTCAGTAAGCATTACTCGCACAGTCACCAATGTTGGTCCCCCAAGTACATATTTTGCAAATGTCCAATTGCCTGGGTATAACATTATTGTTGTGCCAAGTTCCTTGAATTTTAAGAAAATTGGTGAAAAGAAGACATTCCAAGTTATTATACAAGCTAGGAGTGTGACTAAGCGAGGAGATTATCATTTTGGAGAATTGTTATGGACAAATGGAAAGCACAAAGTTAGGAGCCCTATCACAGTTCGGCGAAAATGA 2394 0.4056 MGRSILYLHLLVSSFLTFTLLLNAVHASKKCYIVYLGAHSHGPTPSSIDIETATSSHYDLLGSILGSHERAKEAIIYSYNRHINGFAALLEEEEASDLAKNPKVVSVFLSKEHKLHTTRSWEFLGLGLNGNGANSAWQKGRFGENTIIANIDTGVWPESQSFSDRGIGPVPAKWRGGNICQINKLRGSKKAPCNRKLIGARFFNKAYEAFNGKLHPSQQTARDFVGHGTHTLSIAGGNFVPNASVFGNGNGTAKGGSPRARVAAYKVCWSLTDAASCFGADVLAAIDQAISDGVDVISVSAGGRDVLSPQEIFTDEVSIGAFHALSSNILLIASAGNEGPTPGTVLNVPPWVFTVAASTIDRDFSSTLTFGNNQQVTGASLFVNLPPNQSFSLILSTDAKLSNATRRDAQLCKPGTLDPTKVIGKIVACDREGKIKSVAEGQEALSAGAQGMILGNQKQNGNTLLSEPHVLSTVNYVKKPIKTRPARFDITATYIYILILMDSTINSNTTIRLTQAKTFLGTRPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFATASNLPSDTRRGFPFNVLQGTSMSCPHVAGIAGLLKTLHPDWSPAAIKSAIMTTASTRDNTNKPIRDAFDKTLATPFAYGSGHVQPNSAIDPGLVYDISVMDYLNFLCASGYDQQLISALNFNKTFICLGSHSITDLNYPSITLPNLGLNSVSITRTVTNVGPPSTYFANVQLPGYNIIVVPSSLNFKKIGEKKTFQVIIQARSVTKRGDYHFGELLWTNGKHKVRSPITVRRK. 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00733 797 CDD Peptidases_S8_3 113 619 IPR034197 -
Seca1g00733 797 Pfam Subtilase family 143 624 IPR000209 GO:0006508|GO:0008236
Seca1g00733 797 SUPERFAMILY Subtilisin-like 116 657 IPR036852 GO:0004252|GO:0006508
Seca1g00733 797 Gene3D - 670 796 - -
Seca1g00733 797 Gene3D - 361 520 - -
Seca1g00733 797 FunFam Subtilisin-like protease SBT1.5 145 372 - -
Seca1g00733 797 FunFam Subtilisin-like protease SBT5.3 21 116 - -
Seca1g00733 797 CDD PA_subtilisin_like 367 474 - -
Seca1g00733 797 Gene3D Peptidase S8/S53 domain 146 666 IPR036852 GO:0004252|GO:0006508
Seca1g00733 797 ProSitePatterns Serine proteases, subtilase family, serine active site. 583 593 IPR023828 -
Seca1g00733 797 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 794 IPR045051 -
Seca1g00733 797 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Seca1g00733 797 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Seca1g00733 797 PRINTS Subtilisin serine protease family (S8) signature 582 598 IPR015500 -
Seca1g00733 797 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Seca1g00733 797 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 116 IPR037045 -
Seca1g00733 797 ProSiteProfiles Serine proteases, subtilase domain profile. 120 653 - -
Seca1g00733 797 Pfam Fibronectin type-III domain 699 794 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00733 Seca-Chr1 9488009 9494721 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00733 19 795 Subtilisin-like Serine Gene Family AT5G59810 52.113 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00733 - - gmx:100803751 1333.16