Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00730 ATGGGCAGCTCCATCTTATCCCTCCACCTTATCGTTTCATCATTTTTTCTTTTCTTTTTCTTGCTGGATGCAATCCATGGCAGCAAAAAGTGTTACATTGTATACTTGGGAGCACATTCTCATGGACCAAGCCCTACGTCGGTTGACCTTGAAATTGCTACGAATTCTCATTATGATTTACTAGGTTCAATCTTGGGAAGCCGGGAGAAGGCGAAAGAGGCAATTATTTACTCATATAATAGACACATCAATGGCTTTGCTGCGCTACTTGAAGAAGGAGAAGCAGAAGATATTGCAAAAAAAGCAAATGTGGTGTCTGTGTTCTTGAGTAAAGAGCATAAACTGCACACTACCCGGTCATGGGAATTTCTTGGACTACACAGAAATGGTAAGAACTCTGCATGGCAAAAGGGAAGGTTTGGTGAAAATACAATCATCGGAAACATTGACACTGGTGTTTGGCCCGAATCCAAGAGCTTCAGTGATGAAGGATTTGGCCCTATCCCATCAAAATGGCGTGGGCGAAATGTTTGTGAAATTAACAAACTTCGAGGCTCCAAGAAAAATCCATGCAACAGGAAGCTGATTGGAGCAAGATTCTTCAACAAAGCTTATGAGGCATATTATGGCAAACTCCATCCATCACAATATACAGCACGTGACTTTGTGGGCCATGGTACTCACACTCTATCAACAGCTGGGGGAAACTTTGTTCCAGGTGCAAGTGTATTTGGTATTGGAAATGGTACAGTAAAAGGTGGGTCCCCAAGAGCTCGAGTTGCAACCTACAAAGTTTGTTGGTCTCTAACTGATCCTGCCAACTGTTTTGGTGCGGATGTGTTATCTGCCATTGATCAAGCCATAAGTGATGGTGTTGATATCATCACACTTTCTGCTGGTGGCCAATATCTTGTTAATCCGGAAGATATATTCACAGATGAGGTTTCCATAGGGGCATTCCATGCACTTACTAGAAATATATTATTAGTTGCCTCTGCAGGGAATGATGGACCAACACCTGGAACTGTTGTCAATGTTGCTCCTTGGGTTTTCACAATTGCTGCTAGCACAATAGACAGGGACTTCAGCAGTACTATAACTTTTGGTAACAATCAACAAGTCACGGGTGCCAGTCTTTTTGTAAACTTGCCTCCTAACCAGTCTTTTTCTCTTATCCTTGCTACTGATGCTAAACTTGCCAATGCAACAATTCGAGATGCGCAACTTTGTAGGCCTGGAACACTTGATCGGACAAAAGTAAATGGGAAAATAGTGTCATGTCTTCGAGAAGGAAAAATAAAATCCATTGGTGAGGGTCAGGAAGCTCTATCTGCAGGTGCAAAGGGAATGCTTTTGGGTAATCAACCACAAAATGGGAGAACACTTCTTTCTGAGCCTCATGTTTTATCTACTGTCAATCATCCAAACCCACATCCAGGACCAAAGCCTCCTCGTGATATCACTGCCACGGATGACTCAATGATAAATTCGGGTACTACAATAAGAATGTCCCCTGCAAAAACATTCTATGGAAGAAAGCCAGCTCCGGTTATGGCTTCATTCTCATCTAGAGGACCCAATAAGATTCAACCATCAATACTCAAGCCTGACGTAACTGCCCCTGGTGTGAACATACTAGCTGCCTATTCATTATTTGCTAGTGCATCTAACTTACTAACAGATGCTCGTCGAGGTTTTCCATTCAATGTGTTGCAAGGAACTTCTATGTCTTGTCCTCATGTTGCTGGTATTGCTGGACTTCTCAAAACGCTTCATCCTAATTGGAGCCCAGCAGCTATTAAATCAGCAATCATGACCACAGGTATATATTTGTACTATATATACGTATATATTATATCAACTACACTTGATAACACCAACAAGCCAATTCAGGATGCATTTGAAGGAAAATTAGCAACTCCTTTTGCCTTTGGTTCAGGACATGTTCAACCTGACCATGCAATAGATCCTGGACTTGTTTATGATATAAGCGTCATGGATTACTTGAATTTCTTATGTGCTTCTGGATATGACCAACAACTCATTTCCGCACTTAATTTCAATAGGACATTTATTTGTTCAGGATCTCATAGCTTAACAGACTTGAACTACCCTTCAATCACATTACCAAATCTTAGGTCAAATGTAGTGAATGTTTCTCGCACTGTCACCAATGTTGGGCCTCCAAGCACATATTTTGCCAAAGCCCAATTACCTGGATATAAAATTGTCGTCGTACCAAATTCCTTGACTTTTAAGAAAATTGGTGAAAAGAAGACATTCCAAGTTATTGTACAAGCAACAAGTGTGACTCCACGGAGAAAATATCTATTTGGGGAATTGCGATGGACAAATGGAAAACACATAGTTCGGAGTCCTATTACAGTTCAACGCAAATGA 2400 0.4117 MGSSILSLHLIVSSFFLFFFLLDAIHGSKKCYIVYLGAHSHGPSPTSVDLEIATNSHYDLLGSILGSREKAKEAIIYSYNRHINGFAALLEEGEAEDIAKKANVVSVFLSKEHKLHTTRSWEFLGLHRNGKNSAWQKGRFGENTIIGNIDTGVWPESKSFSDEGFGPIPSKWRGRNVCEINKLRGSKKNPCNRKLIGARFFNKAYEAYYGKLHPSQYTARDFVGHGTHTLSTAGGNFVPGASVFGIGNGTVKGGSPRARVATYKVCWSLTDPANCFGADVLSAIDQAISDGVDIITLSAGGQYLVNPEDIFTDEVSIGAFHALTRNILLVASAGNDGPTPGTVVNVAPWVFTIAASTIDRDFSSTITFGNNQQVTGASLFVNLPPNQSFSLILATDAKLANATIRDAQLCRPGTLDRTKVNGKIVSCLREGKIKSIGEGQEALSAGAKGMLLGNQPQNGRTLLSEPHVLSTVNHPNPHPGPKPPRDITATDDSMINSGTTIRMSPAKTFYGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNLLTDARRGFPFNVLQGTSMSCPHVAGIAGLLKTLHPNWSPAAIKSAIMTTGIYLYYIYVYIISTTLDNTNKPIQDAFEGKLATPFAFGSGHVQPDHAIDPGLVYDISVMDYLNFLCASGYDQQLISALNFNRTFICSGSHSLTDLNYPSITLPNLRSNVVNVSRTVTNVGPPSTYFAKAQLPGYKIVVVPNSLTFKKIGEKKTFQVIVQATSVTPRRKYLFGELRWTNGKHIVRSPITVQRK. 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00730 799 Gene3D Peptidase S8/S53 domain 144 668 IPR036852 GO:0004252|GO:0006508
Seca1g00730 799 Gene3D - 359 510 - -
Seca1g00730 799 Pfam Subtilase family 141 621 IPR000209 GO:0006508|GO:0008236
Seca1g00730 799 MobiDBLite consensus disorder prediction 473 493 - -
Seca1g00730 799 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 796 IPR045051 -
Seca1g00730 799 CDD Peptidases_S8_3 113 607 IPR034197 -
Seca1g00730 799 ProSitePatterns Serine proteases, subtilase family, serine active site. 573 583 IPR023828 -
Seca1g00730 799 Gene3D - 672 798 - -
Seca1g00730 799 Pfam Fibronectin type-III domain 701 796 IPR041469 -
Seca1g00730 799 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Seca1g00730 799 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Seca1g00730 799 ProSiteProfiles Serine proteases, subtilase domain profile. 120 655 - -
Seca1g00730 799 CDD PA_subtilisin_like 365 472 - -
Seca1g00730 799 SUPERFAMILY Subtilisin-like 115 659 IPR036852 GO:0004252|GO:0006508
Seca1g00730 799 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Seca1g00730 799 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Seca1g00730 799 PRINTS Subtilisin serine protease family (S8) signature 572 588 IPR015500 -
Seca1g00730 799 FunFam Subtilisin-like protease SBT1.5 143 371 - -
Seca1g00730 799 FunFam Subtilisin-like protease SBT5.3 21 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00730 Seca-Chr1 9455492 9470997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00730 32 797 Subtilisin-like Serine Gene Family AT2G04160 51.157 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00730 - - gmx:100813564 1238.79